Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_O17
(402 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 180 2e-45
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 180 2e-45
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 180 2e-45
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 34 0.15
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 34 0.15
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 34 0.15
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 34 0.15
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 34 0.15
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 34 0.15
BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kin... 29 5.8
AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kin... 29 5.8
AK127729-1|BAC87105.1| 870|Homo sapiens protein ( Homo sapiens ... 29 5.8
J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipin... 29 7.7
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -1
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -1
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -1
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -1
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 180 bits (438), Expect = 2e-45
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = -1
Query: 339 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 160
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 159 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITXP 43
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI P
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDP 99
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.15
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 270 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 172
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC117180-1|AAI17181.1| 2527|Homo sapiens leucine-rich repeat kinase
2 protein.
Length = 2527
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 220 LSKSFQSLLVS*AI-FSRFHHQSKAGVN*LDGLFLFLCCNHFGSVNANESSPRAQMEKA 393
LS SF LLV + FH S + D FL LCC F V ++ +E+A
Sbjct: 658 LSASFSKLLVHHSFDLVIFHQMSSNIMEQKDQQFLNLCCKCFAKVAMDDYLKNVMLERA 716
>AY792511-1|AAV63975.1| 2527|Homo sapiens leucine-rich repeat kinase
2 protein.
Length = 2527
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 220 LSKSFQSLLVS*AI-FSRFHHQSKAGVN*LDGLFLFLCCNHFGSVNANESSPRAQMEKA 393
LS SF LLV + FH S + D FL LCC F V ++ +E+A
Sbjct: 658 LSASFSKLLVHHSFDLVIFHQMSSNIMEQKDQQFLNLCCKCFAKVAMDDYLKNVMLERA 716
>AK127729-1|BAC87105.1| 870|Homo sapiens protein ( Homo sapiens
cDNA FLJ45829 fis, clone NT2RP8006452. ).
Length = 870
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 220 LSKSFQSLLVS*AI-FSRFHHQSKAGVN*LDGLFLFLCCNHFGSVNANESSPRAQMEKA 393
LS SF LLV + FH S + D FL LCC F V ++ +E+A
Sbjct: 257 LSASFSKLLVHHSFDLVIFHQMSSNIMEQKDQQFLNLCCKCFAKVAMDDYLKNVMLERA 315
>J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipine
oxidase protein.
Length = 502
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 167 DFLSGGAFLAMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDS 307
DFL FL++I F +P V +C++P++ +F+ K+ + + +S
Sbjct: 214 DFLDP-FFLSIIFPFLIPILEVLNICVFPRE-VTNFLRKSVKRMKES 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,695,795
Number of Sequences: 237096
Number of extensions: 1042879
Number of successful extensions: 1929
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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