Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_O15
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101816-1|AAI01817.1|  169|Homo sapiens fucosyltransferase 8 (a...    31   4.0  
BC093889-1|AAH93889.1|  169|Homo sapiens fucosyltransferase 8 (a...    31   4.0  
AJ514325-1|CAD55805.1|  169|Homo sapiens fucosyltransferase 8 pr...    31   4.0  
AJ514324-1|CAD55804.1|  169|Homo sapiens fucosyltransferase 8 pr...    31   4.0  

>BC101816-1|AAI01817.1|  169|Homo sapiens fucosyltransferase 8
           (alpha (1,6) fucosyltransferase) protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 120 TLNRYPGFNHVSDNATTTGECLFNKYIKSCFFGTI 16
           TL RYP +  +SDN+ +    L N+Y ++   G I
Sbjct: 11  TLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI 45


>BC093889-1|AAH93889.1|  169|Homo sapiens fucosyltransferase 8
           (alpha (1,6) fucosyltransferase) protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 120 TLNRYPGFNHVSDNATTTGECLFNKYIKSCFFGTI 16
           TL RYP +  +SDN+ +    L N+Y ++   G I
Sbjct: 11  TLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI 45


>AJ514325-1|CAD55805.1|  169|Homo sapiens fucosyltransferase 8
           protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 120 TLNRYPGFNHVSDNATTTGECLFNKYIKSCFFGTI 16
           TL RYP +  +SDN+ +    L N+Y ++   G I
Sbjct: 11  TLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI 45


>AJ514324-1|CAD55804.1|  169|Homo sapiens fucosyltransferase 8
           protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 120 TLNRYPGFNHVSDNATTTGECLFNKYIKSCFFGTI 16
           TL RYP +  +SDN+ +    L N+Y ++   G I
Sbjct: 11  TLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVI 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,150,766
Number of Sequences: 237096
Number of extensions: 1341514
Number of successful extensions: 2114
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)