Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_O15
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-27|CAB55133.2|  241|Caenorhabditis elegans Hypothetical...    29   2.5  
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-indu...    27   7.5  
AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical...    27   10.0 

>AL117204-27|CAB55133.2|  241|Caenorhabditis elegans Hypothetical
           protein Y116A8C.43 protein.
          Length = 241

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +2

Query: 59  HSPVVV---ALSE--TWLKPGYLFKVPGYTCLRDDRYDGYGGVALLVRNSIDFSRISFSS 223
           H P  V   ALSE  TW + G  F  P   C   + +  +GG +L + N+ DF  ++   
Sbjct: 61  HLPYTVKRCALSEYFTWEESGTFF--PFQKC---NNFVFFGGNSLQILNNTDFKMLNCKY 115

Query: 224 LISNDAINIVGIKIY 268
           LI +   N+ G++ Y
Sbjct: 116 LIIDSRENLRGLENY 130


>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
           protein K10D2.3 protein.
          Length = 1425

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = -1

Query: 192 EFLTSNATPP*PSYLSSRKQVYPGTLNRYPGFNHVSDNATTTGECLFNKYIKSCFFGTIX 13
           E L     PP  ++L S ++V  GTL  Y     V  N    GE +   Y+ +  F +I 
Sbjct: 307 EHLLKIIPPPTEAHLESVEKVLEGTLKSY---QQVRQNGIEIGETII-YYLSTTVFPSIG 362

Query: 12  LQ 7
           LQ
Sbjct: 363 LQ 364


>U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-induced
           kinase) homologprotein 1 protein.
          Length = 641

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 310 KRGTSEINGNYRNIINFDADNINGII 233
           K G + +    RN+I  DAD INGI+
Sbjct: 610 KNGYNNVPLLLRNVIRTDADGINGIV 635


>AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical
           protein Y43F8B.15 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 140 RDDRYDGYGGVALLVRNSIDFSRISFSSLISNDAIN 247
           R++    +GG+  +V N+     I FS ++   AIN
Sbjct: 18  RNEMGMNHGGIVTIVENNFRIEEIMFSHIVRRKAIN 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,696,751
Number of Sequences: 27780
Number of extensions: 213550
Number of successful extensions: 509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)