Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_O12
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 138 3e-33
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 138 3e-33
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 138 3e-33
U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical pr... 31 0.78
AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical ... 29 1.8
AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm rece... 29 1.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 27 9.6
U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta f... 27 9.6
U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine rece... 27 9.6
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 27 9.6
AF024500-6|AAB70361.1| 357|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 138 bits (333), Expect = 3e-33
Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = -2
Query: 578 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 399
KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 362 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 421
Query: 398 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 288
ATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 422 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 459
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 138 bits (333), Expect = 3e-33
Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = -2
Query: 578 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 399
KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 347 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 406
Query: 398 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 288
ATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 407 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 138 bits (333), Expect = 3e-33
Identities = 61/98 (62%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = -2
Query: 578 KGWFIAMVSTTVETNDPESEIRPGLALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYD 399
KGW++AMVSTTVET +PE+E+ PGL LLGAI +KF+ ++D YEP D GS+SQIFIS+SYD
Sbjct: 347 KGWYLAMVSTTVETANPEAEVLPGLQLLGAIAEKFIQISDVYEPSDLGSESQIFISQSYD 406
Query: 398 ATTHFETTCLDVLKIYKHGTGEEFDFSKV-KLELGEED 288
ATTHFETTC DVL +++ GT +EFDF+ + L L +++
Sbjct: 407 ATTHFETTCKDVLNMFERGTTKEFDFTNITHLSLNDQE 444
>U39650-5|AAK39185.2| 632|Caenorhabditis elegans Hypothetical
protein C25A11.2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 222 NKQLNNKQYTYYFFMRPLSYLLILFTKFQLDFREIKFFPSTMF---INFKHIQT 374
N + + Q+T+Y P YLLI FQ++ R++ T+F ++ ++IQT
Sbjct: 341 NVKSHTSQFTFYLENSPNGYLLIAGGCFQMESRQLVNLKLTLFDSGVSCRNIQT 394
>AL032655-5|CAA21723.1| 360|Caenorhabditis elegans Hypothetical
protein Y6B3B.10 protein.
Length = 360
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 213 FSLNKQLNNKQYTYYFFMRPLSYLL--ILFTKFQLDFREIKFFPSTMF 350
F L K+ N + Y YYF M +++L I++ F+L + K +T++
Sbjct: 231 FYLKKRTNRQYYKYYFLMGNAAFILFAIIWVIFRLYWYTCKLLYATIY 278
>AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm
receptor protein 253 protein.
Length = 354
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 258 FFMRPLSYLLILFTKFQLDFREIKFFPSTMFINFKHIQTSCFKVCGGIIRFRNKYLALAT 437
FF + ++LLI TK + R I F +FI F + + I F +YLAL++
Sbjct: 72 FFTKDSAFLLITNTKNSIFPRRISMFVEELFIGFYGLAMAIL-----AIHFIYRYLALSS 126
Query: 438 IIDWL 452
I WL
Sbjct: 127 NI-WL 130
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 440 DGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELGEEDQ*ITERS 267
D + QIF+ + D + + V+K+Y GTGE+ D +K +L ED RS
Sbjct: 65 DREKDQIFLQTAEDLKEAIKFSRF-VVKLYAEGTGEK-DLKGLKKDLKSEDDEDDRRS 120
>Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical
protein F58G1.7 protein.
Length = 569
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 210 GFSLNKQLNNKQYTYYFF-----MRPLSYLLILFTKFQLDFREIKFFPSTMFINF 359
GF++N L N + Y + M L L + FQL F +T+F+NF
Sbjct: 235 GFTVNFYLLNSSFQYQIYSPMPTMHKLRLTLTFYGVFQLFISIFIFLSATIFLNF 289
>Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical
protein C01G10.5 protein.
Length = 138
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 171 YLNMKYYKVTIH*GFSLNKQLNNKQY-TYYFFMRPLSYLLILFTKFQLDF-REIKFFPST 344
Y YY + G+ + NN Y TYY+ YL + F + F R+I ++P
Sbjct: 40 YTTYYYYPNNNNNGYYYDNGYNNNGYTTYYYTYGKNCYLQVDLDIFNVKFARKIYYYPDG 99
Query: 345 MFIN 356
+ N
Sbjct: 100 TYNN 103
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 483 PNGTQKSQTRSDFRFRIIGLNSSRDH 560
PN QK + + DF+ RII +S +DH
Sbjct: 156 PNWPQKFRGQDDFKGRIIHSHSYKDH 181
>U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta
family protein 4,isoform a protein.
Length = 1080
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 419 FISESYDATTHFETTCLDVLKIYKHGTGEEFDFSKVKLELGEE 291
FI++ D++ + ET C++ + I + E FDF L +E
Sbjct: 148 FITDIVDSSKNNETVCINNMNILSLLSEEVFDFGSQNLTQAKE 190
>U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine
receptor, class r protein9 protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = -2
Query: 506 LALLGAIRQKFVSVTDYYEPIDDGSQSQIFISESYDATTHFETTCLDVLKIYKHGTGEEF 327
+A++ I F++ YY I+ S+IFI + + T CL + E
Sbjct: 145 VAIMSWIIYNFINGKIYYGGIEQNLLSRIFILVTNLYIWYISTICLAIYIFMSSALNREV 204
Query: 326 DFSKVKLELGEEDQ 285
++ +L+ +E++
Sbjct: 205 NYFNEELQKAKEEK 218
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 483 PNGTQKSQTRSDFRFRIIGLNSSRDH 560
PN QK + + DF+ RII +S +DH
Sbjct: 156 PNWPQKFRGQDDFKGRIIHSHSYKDH 181
>AF024500-6|AAB70361.1| 357|Caenorhabditis elegans Hypothetical
protein K06H6.1 protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 174 LNMKYYKVTIH*GFSLNKQLNNKQY-TY-YFFMRP 272
LN++ YKV H GF ++LN Y T+ Y +RP
Sbjct: 38 LNLQEYKVKTHKGFITMEELNENVYKTFGYKIIRP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,964,405
Number of Sequences: 27780
Number of extensions: 233872
Number of successful extensions: 532
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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