Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_N17
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    29   5.6  
AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin...    29   5.6  

>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 30/78 (38%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +2

Query: 569 GSPSSVSPPGNAPGG-TLDPLVGTQLFGPPTKIWY*GF-PCSIPPHGT*AQP*EGTSLPG 742
           G+P S  PP   PGG    P  G   +GPP      GF P   PP G    P  G + P 
Sbjct: 418 GAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT----GFPPVGAPPPGAAGAP--GGN-PF 470

Query: 743 IVAPS*TARATYRGSPEQ 796
              PS T    YR SP Q
Sbjct: 471 ARGPSATG---YRQSPYQ 485


>Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical
           protein T21B4.2 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 654 GGPNNWVPTSGSNVPPG--AFPGGETEDGEPLYIGRVRHEGSLTTGKVQQ 511
           G P N  P+ G+  PPG    PGG   DG+P   G     G++T    QQ
Sbjct: 190 GAPGN-TPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQ 238


>Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical
           protein F17C8.2 protein.
          Length = 296

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/58 (37%), Positives = 25/58 (43%)
 Frame = +2

Query: 569 GSPSSVSPPGNAPGGTLDPLVGTQLFGPPTKIWY*GFPCSIPPHGT*AQP*EGTSLPG 742
           G P    PPG+A G   D   G Q  GPP +    G P +  P G    P  G  LPG
Sbjct: 224 GPPGPGGPPGDAGGAGSDGAPGPQ--GPPGQD---GTPGNAGPDGQPGSP-GGPGLPG 275


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 684 VQYHPMERKRSHEKERVYQGSWHLREPH-EPHTEALLSSPVLPQRRQEVLDLLK 842
           VQ+  +E     E    YQ    LRE + + H +  L  P L QRRQE+LD ++
Sbjct: 292 VQFENLEHIIGEEHHAEYQ---QLREDYRQAHVD--LIGPELEQRRQEILDRMR 340


>AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin
           protein 71 protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 407 AYIRLHQKYTKQLFISNDVFMIMHVSYRLF*FAAKKKQMVDYFHDYS 267
           AY    + Y  Q   SN +     V++ +  F  ++ Q + YF+DY+
Sbjct: 181 AYSNDFEPYIVQNTFSNSILYKQQVTFAIIRFDTRQPQSIMYFNDYN 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,100,143
Number of Sequences: 27780
Number of extensions: 505406
Number of successful extensions: 1403
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)