Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_N15
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 105 2e-23
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 56 3e-08
AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical ... 41 9e-04
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 33 0.24
U88176-1|AAO91741.1| 459|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 28 6.7
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine re... 27 8.9
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 105 bits (253), Expect = 2e-23
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
Frame = -1
Query: 654 RDSPAXLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFSF 475
R+ P LLAAFT +QA T+G VV+ + VVL+A +T VV SL YTL +KRDFS
Sbjct: 131 REVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTLQNKRDFS- 189
Query: 474 IGY-MXXXXXXXXXXXXXXXXXVQSAAFEMALSIVGAIFFSMFLVYDTHQMMRVLSPEEY 298
+GY S A +++ GA F + LV D +M SPE+Y
Sbjct: 190 VGYASMGSLLCVLLWAGIFQMFFMSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDY 249
Query: 297 ILATINLYLDILNLFLYILRILNELNR 217
I A ++LY+DILNLF+ IL+I+ E N+
Sbjct: 250 ICACVSLYMDILNLFIRILQIVAEANK 276
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = -1
Query: 657 RRDSPAXLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFS 478
RR P L + FT+ + V+ ++++ VVL ALA+ FS+ + +K D +
Sbjct: 143 RRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIGCTFSIVIVASQTKFDLT 202
Query: 477 -FIGYMXXXXXXXXXXXXXXXXXVQSAAFE---MALSIVGAIFFSMFLVYDTHQMMR--- 319
+GY+ + M ++ GA+ ++L D +M
Sbjct: 203 AHMGYILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMMLYLFLDVQMLMGGKK 262
Query: 318 -VLSPEEYILATINLYLDILNLFLYILRILNELN 220
+SPEEYI A++ +++DI+ +F ++L + N
Sbjct: 263 YEISPEEYIFASVQIFIDIVQMFWFLLSLFGSRN 296
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Frame = -1
Query: 657 RRDSPAXLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFS 478
RR P + LL FT+ A V + YN VL L +T S+ ++++ +K D +
Sbjct: 91 RRQFPVNIILLTIFTLSAAVMTMFVTACYNVQSVLICLCITTVCSGSVIIFSMKTKSDLT 150
Query: 477 F---IGYMXXXXXXXXXXXXXXXXXVQSAAFEMAL-SIVGAIFFSMFLVYDTHQMMR--- 319
I +M + F ++ S + A+ +L D +M
Sbjct: 151 SKMGIAFMLSMVLFSFGIFALIFTLAFNWQFLYSVYSGLAALLMMFYLAIDVQLLMGGRK 210
Query: 318 -VLSPEEYILATINLYLDILNLFLYILRI 235
LSPE+YI A + ++LDILN+FL +L I
Sbjct: 211 YELSPEDYIFAAMEIFLDILNIFLMLLNI 239
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Frame = -1
Query: 657 RRDSPAXLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFS 478
RR P L + FT+ + V+ ++++ VVL ALA+ FS+ + +K D +
Sbjct: 143 RRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIGCTFSIVIVASQTKFDLT 202
Query: 477 -FIGYMXXXXXXXXXXXXXXXXXVQSAAFE---MALSIVGAIFFSMFLVYDTHQMMR--- 319
+GY+ + M ++ GA+ ++L D +M
Sbjct: 203 AHMGYILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALIMMLYLFLDVQMLMGGKK 262
Query: 318 -VLSPEEYILATINLYLDILNLFLYILRI 235
+SPEEYI A++ +++DI+ +F ++L +
Sbjct: 263 YEISPEEYIFASVQIFIDIVQMFWFLLSL 291
>AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical
protein Y42H9AR.2 protein.
Length = 133
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Frame = -1
Query: 585 VVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFSF---IGYMXXXXXXXXXXXXXXXX 415
+ + Y+ VL +L +T S+ L+ +K+D + + ++
Sbjct: 5 ITATYSADAVLISLLITTGCSASIILFAATTKKDLTSCLGVAFILGICLMLFGLMACIFC 64
Query: 414 XVQSAAF-EMALSIVGAIFFSMFLVYDTHQMM---RV-LSPEEYILATINLYLDILNLFL 250
+ F + +++GA+ +L D +M RV +SPEEYI A ++++DIL +FL
Sbjct: 65 IFLNWQFLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEISPEEYIFAATHVFVDILGMFL 124
Query: 249 YILRIL 232
IL ++
Sbjct: 125 NILGVV 130
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 16/69 (23%)
Frame = -1
Query: 372 GAIFFSMFLVYDTHQMMRVL-----SPEEY-----------ILATINLYLDILNLFLYIL 241
G I FS FL+YDT ++++ S + Y I A +++Y+D+LN+F+ ++
Sbjct: 271 GLILFSAFLLYDTQRLVKKAENHPHSSQLYGSDMQIRSFDPINAQMSIYMDVLNIFMRLV 330
Query: 240 RILNELNRN 214
I+ +N N
Sbjct: 331 MIMGGMNGN 339
>U88176-1|AAO91741.1| 459|Caenorhabditis elegans Hypothetical
protein F18F11.5 protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = -1
Query: 402 AAFEMALSIVGAIFFSMFLVYDTHQMMRVLSPEEYILATINLYLDILNLFLYILRILNEL 223
AA +A ++ G +FF++FL+Y+ Q+ S E + I L L + + L L N L
Sbjct: 328 AALSLA-AVAGGVFFAIFLIYNGIQIACQCSLNEGFVVLIALILLPIIILLTTLCCNNSL 386
Query: 222 NR 217
+R
Sbjct: 387 DR 388
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 455 ATSMYPMNEKSRLELSVYSVRENTTANVKARACNTTMVL*YDTTTPIVYAWITVNAARR 631
AT++YP E +EL + R TT T TTT + ++ RR
Sbjct: 136 ATTLYPEEEAEEIELPTTTTRRRTTTTTTTTTPPPTTTTTVRTTTALTRPNPSIEQVRR 194
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 340 VNEEHAEEYRADDGQSHFEGGALHHQLKKTPQNENCQTSYE 462
+NEE +E R + E +HQL + +N+ C+T E
Sbjct: 117 INEEMSENLRKLALKPASEANKKYHQLSQPTKNKRCETVLE 157
>AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine
receptor, class z protein64 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 405 SAAFEMALSIVGAIFFSMFLVYDTHQMMRVLSPEEY-ILATINLYLDILNLFLYILRILN 229
+A + L I + F ++ T + + V + Y ILA + + L I N F +++ ++N
Sbjct: 125 NAVLDFFLIISPIVRFLVYFFPSTEKPITVANTHIYKILAYLYVILIIKNFFFFLMEVIN 184
Query: 228 E 226
E
Sbjct: 185 E 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,461,794
Number of Sequences: 27780
Number of extensions: 332697
Number of successful extensions: 817
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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