Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_N05
(479 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022093-1|AAH22093.3| 136|Homo sapiens TNRC5 protein protein. 67 3e-11
BC008961-1|AAH08961.1| 278|Homo sapiens trinucleotide repeat co... 67 3e-11
BC008898-1|AAH08898.1| 278|Homo sapiens trinucleotide repeat co... 67 3e-11
BC004423-1|AAH04423.1| 278|Homo sapiens trinucleotide repeat co... 67 3e-11
AY358960-1|AAQ89319.1| 278|Homo sapiens CTG4A protein. 67 3e-11
AL035587-1|CAB75301.1| 278|Homo sapiens protein ( Human DNA seq... 67 3e-11
AK090425-1|BAC03406.1| 114|Homo sapiens FLJ00338 protein protein. 67 3e-11
AF161347-1|AAF28907.1| 142|Homo sapiens HSPC084 protein. 67 3e-11
BC032339-1|AAH32339.1| 248|Homo sapiens PRotein Associated with... 50 3e-06
BC019903-1|AAH19903.2| 246|Homo sapiens MGC40499 protein protein. 50 3e-06
AY359100-1|AAQ89458.1| 248|Homo sapiens GPVR1909 protein. 50 3e-06
AK075537-1|BAC11680.1| 248|Homo sapiens protein ( Homo sapiens ... 50 3e-06
U00578-1|AAA18275.1| 126|Homo sapiens immunoglobulin heavy chai... 30 3.7
AY607559-1|AAT02153.1| 90|Homo sapiens immunoglobulin heavy ch... 30 4.8
AY429978-1|AAR38729.1| 97|Homo sapiens immunoglobulin heavy ch... 30 4.8
AY686887-1|AAW67368.1| 125|Homo sapiens rotavirus-specific inte... 29 6.4
U17195-1|AAA92354.2| 2319|Homo sapiens A-kinase anchor protein p... 29 8.5
BC150288-1|AAI50289.1| 2319|Homo sapiens A kinase (PRKA) anchor ... 29 8.5
BC150185-1|AAI50186.1| 1075|Homo sapiens AKAP6 protein protein. 29 8.5
AY393081-1|AAS86017.1| 168|Homo sapiens immunoglobulin heavy ch... 29 8.5
AJ862565-1|CAH74248.1| 132|Homo sapiens immunoglobulin heavy ch... 29 8.5
AF460783-1|AAM88154.1| 60|Homo sapiens immunoglobulin heavy ch... 29 8.5
AB002309-1|BAA20770.2| 2324|Homo sapiens KIAA0311 protein. 29 8.5
>BC022093-1|AAH22093.3| 136|Homo sapiens TNRC5 protein protein.
Length = 136
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 23 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 75
>BC008961-1|AAH08961.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 165 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
>BC008898-1|AAH08898.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 165 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
>BC004423-1|AAH04423.1| 278|Homo sapiens trinucleotide repeat
containing 5 protein.
Length = 278
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 165 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
>AY358960-1|AAQ89319.1| 278|Homo sapiens CTG4A protein.
Length = 278
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 165 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
>AL035587-1|CAB75301.1| 278|Homo sapiens protein ( Human DNA
sequence from clone RP3-475N16 on chromosome 6p12.3-21.2
Contains part of a novel gene,a novel gene (CTG4A), a
gene similar ).
Length = 278
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 165 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 217
>AK090425-1|BAC03406.1| 114|Homo sapiens FLJ00338 protein protein.
Length = 114
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 1 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 53
>AF161347-1|AAF28907.1| 142|Homo sapiens HSPC084 protein.
Length = 142
Score = 66.9 bits (156), Expect = 3e-11
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGE 315
QC+ L+EE E +EDWY NHQ +EDL +LC H LKG D SCL E+ + +KG+
Sbjct: 13 QCDVLVEEFEEVIEDWYRNHQ-EEDLTEFLCANHVLKGKDTSCLAEQWSGKKGD 65
>BC032339-1|AAH32339.1| 248|Homo sapiens PRotein Associated with
Tlr4 protein.
Length = 248
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKGIKER 297
QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G +E+
Sbjct: 155 QCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG-EEK 212
Query: 296 SE 291
+E
Sbjct: 213 TE 214
>BC019903-1|AAH19903.2| 246|Homo sapiens MGC40499 protein protein.
Length = 246
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKGIKER 297
QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G +E+
Sbjct: 155 QCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG-EEK 212
Query: 296 SE 291
+E
Sbjct: 213 TE 214
>AY359100-1|AAQ89458.1| 248|Homo sapiens GPVR1909 protein.
Length = 248
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKGIKER 297
QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G +E+
Sbjct: 155 QCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG-EEK 212
Query: 296 SE 291
+E
Sbjct: 213 TE 214
>AK075537-1|BAC11680.1| 248|Homo sapiens protein ( Homo sapiens
cDNA PSEC0237 fis, clone HEMBA1007186, weakly similar to
Homo sapiens CTG4a mRNA. ).
Length = 248
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -1
Query: 476 QCESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEKGEKGIKER 297
QCE++LEE E V DWY++HQ ++ L+ +LC H L + +CL E ++ G +E+
Sbjct: 155 QCETMLEEFEDIVGDWYFHHQ-EQPLQNFLCEGHVLPAAETACLQETWTGKEITDG-EEK 212
Query: 296 SE 291
+E
Sbjct: 213 TE 214
>U00578-1|AAA18275.1| 126|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 126
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV*SFFSTY 269
FSL + DT+VYYC H S++S Y
Sbjct: 80 FSLKLSSVTAADTAVYYCAGHGSSWYSVY 108
>AY607559-1|AAT02153.1| 90|Homo sapiens immunoglobulin heavy chain
CDR3 protein.
Length = 90
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV*SFFSTY 269
FSL + DT+VYYC H F+S Y
Sbjct: 46 FSLKLSSVTAADTAVYYCARHAYDFWSGY 74
>AY429978-1|AAR38729.1| 97|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 97
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV*SFFSTY 269
FSL + DT+VYYC H F+S Y
Sbjct: 64 FSLKLSSVTAADTAVYYCARHARDFWSGY 92
>AY686887-1|AAW67368.1| 125|Homo sapiens rotavirus-specific
intestinal-homing antibody heavy chain variable region
protein.
Length = 125
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV 248
FSL +Y DT VYYC H+
Sbjct: 82 FSLRLSYVTTADTGVYYCARHL 103
>U17195-1|AAA92354.2| 2319|Homo sapiens A-kinase anchor protein
protein.
Length = 2319
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 461 LEEXEIAVEDWYWNHQGKEDLKIYLCTKHALK-GVDDSCLYEELNNEKGEKGIK----ER 297
L E E+W +DLK+YL T + K VD C +E E+G + ++ +
Sbjct: 795 LNEAMETTENWTPPKAEMDDLKLYLETHLSFKLNVDSHCALKEAVEEEGHQLLELIASHK 854
Query: 296 SEL*DLLTQICTE 258
+ L D+L I ++
Sbjct: 855 AGLKDMLRMIASQ 867
>BC150288-1|AAI50289.1| 2319|Homo sapiens A kinase (PRKA) anchor
protein 6 protein.
Length = 2319
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 461 LEEXEIAVEDWYWNHQGKEDLKIYLCTKHALK-GVDDSCLYEELNNEKGEKGIK----ER 297
L E E+W +DLK+YL T + K VD C +E E+G + ++ +
Sbjct: 795 LNEAMETTENWTPPKAEMDDLKLYLETHLSFKLNVDSHCALKEAVEEEGHQLLELIASHK 854
Query: 296 SEL*DLLTQICTE 258
+ L D+L I ++
Sbjct: 855 AGLKDMLRMIASQ 867
>BC150185-1|AAI50186.1| 1075|Homo sapiens AKAP6 protein protein.
Length = 1075
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 461 LEEXEIAVEDWYWNHQGKEDLKIYLCTKHALK-GVDDSCLYEELNNEKGEKGIK----ER 297
L E E+W +DLK+YL T + K VD C +E E+G + ++ +
Sbjct: 795 LNEAMETTENWTPPKAEMDDLKLYLETHLSFKLNVDSHCALKEAVEEEGHQLLELIASHK 854
Query: 296 SEL*DLLTQICTE 258
+ L D+L I ++
Sbjct: 855 AGLKDMLRMIASQ 867
>AY393081-1|AAS86017.1| 168|Homo sapiens immunoglobulin heavy chain
protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV*SFFSTY 269
FSL + +DT VYYC H F+S Y
Sbjct: 87 FSLKLSSVTAVDTDVYYCARHDHDFWSGY 115
>AJ862565-1|CAH74248.1| 132|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 132
Score = 29.1 bits (62), Expect = 8.5
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -1
Query: 425 WNHQGKEDLKIYLCTKHALKGVDDSC 348
WN D +Y C +H G D C
Sbjct: 72 WNSVQSSDSAVYYCARHGFSGCSDRC 97
>AF460783-1|AAM88154.1| 60|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 60
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 183 FSLYFTYTINLDTSVYYCRSHV*SFFSTY 269
FSL + DT+VYYC HV S + Y
Sbjct: 29 FSLKLSSVTAADTAVYYCARHVGSSYPDY 57
>AB002309-1|BAA20770.2| 2324|Homo sapiens KIAA0311 protein.
Length = 2324
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = -1
Query: 461 LEEXEIAVEDWYWNHQGKEDLKIYLCTKHALK-GVDDSCLYEELNNEKGEKGIK----ER 297
L E E+W +DLK+YL T + K VD C +E E+G + ++ +
Sbjct: 800 LNEAMETTENWTPPKAEMDDLKLYLETHLSFKLNVDSHCALKEAVEEEGHQLLELIASHK 859
Query: 296 SEL*DLLTQICTE 258
+ L D+L I ++
Sbjct: 860 AGLKDMLRMIASQ 872
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,264,112
Number of Sequences: 237096
Number of extensions: 895695
Number of successful extensions: 6989
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6977
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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