Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_N05
         (479 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70205-9|CAA94121.1|  191|Caenorhabditis elegans Hypothetical pr...    47   6e-06
AL031265-1|CAA20327.1|  191|Caenorhabditis elegans Hypothetical ...    47   6e-06
Z72510-1|CAA96651.1|  572|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical pr...    27   5.3  
AF026205-7|AAD47130.1|  118|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z70205-9|CAA94121.1|  191|Caenorhabditis elegans Hypothetical
           protein C11H1.7 protein.
          Length = 191

 Score = 47.2 bits (107), Expect = 6e-06
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -1

Query: 473 CESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEK 321
           CESLLE+ E  +E+W+ N    EDL   LC ++ALK  + SC ++ L++++
Sbjct: 140 CESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC-FDHLDHKQ 189


>AL031265-1|CAA20327.1|  191|Caenorhabditis elegans Hypothetical
           protein C11H1.7 protein.
          Length = 191

 Score = 47.2 bits (107), Expect = 6e-06
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -1

Query: 473 CESLLEEXEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEK 321
           CESLLE+ E  +E+W+ N    EDL   LC ++ALK  + SC ++ L++++
Sbjct: 140 CESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC-FDHLDHKQ 189


>Z72510-1|CAA96651.1|  572|Caenorhabditis elegans Hypothetical
           protein F53B7.2 protein.
          Length = 572

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 78  SSLIT*LCNKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDT 221
           S L+  +CN   F  +I+    S+ ++  ++ YYP  L+F Y + L T
Sbjct: 126 SDLVLLVCN---FFMLIFPVIASMSNSYLLHDYYPVFLWFAYPVGLST 170


>Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical
           protein M01B2.3 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 120 SIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDTSVYY 233
           SI Y K+  +  + + + Y+ FS+   YT+NL T ++Y
Sbjct: 29  SIFYQKRIPINQSMT-FIYWKFSVDVVYTLNLTTLMFY 65


>Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical
           protein W01B6.3 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 375 MFCT*IYFEIFFTLMVPIPVFDG 443
           + C  I+FE+FF   +P+P + G
Sbjct: 317 LLCGLIFFEVFFIFHMPLPFYPG 339


>U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical
           protein F26A10.2 protein.
          Length = 620

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 99  CNKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTY-TINLDTSVY 230
           C K+ FNS+ Y K+H++KH++      PF   F + T    +++Y
Sbjct: 53  CGKL-FNSVWYLKQHAVKHSNDR----PFKCKFCFKTYKFRSNLY 92


>AF026205-7|AAD47130.1|  118|Caenorhabditis elegans Hypothetical
           protein T23E7.2d protein.
          Length = 118

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 174 YYPFSLYFTYTINLDTSVYY 233
           YYPF LY  YT++L T   Y
Sbjct: 27  YYPFYLYNVYTLSLITKSPY 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,430,952
Number of Sequences: 27780
Number of extensions: 149722
Number of successful extensions: 358
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)