Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_N05
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   3.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   9.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   9.1  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 114 FNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDT 221
           F  ++Y  ++S     +   +YP+  Y T+ I  DT
Sbjct: 206 FALLVYDFRNSRSWRITNNLFYPYPPYGTFNIKGDT 241


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 381 CT*IYFEIFFTLMVPIPV 434
           C  +Y+ I +   +PIPV
Sbjct: 104 CKKLYYNINYIEQIPIPV 121


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 381 CT*IYFEIFFTLMVPIPV 434
           C  +Y+ I +   +PIPV
Sbjct: 109 CKKLYYNINYIEQIPIPV 126


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 381 CT*IYFEIFFTLMVPIPV 434
           C  +Y+ I +   +PIPV
Sbjct: 109 CKKLYYNINYIEQIPIPV 126


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 381 CT*IYFEIFFTLMVPIPV 434
           C  +Y+ I +   +PIPV
Sbjct: 109 CKKLYYNINYIEQIPIPV 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,825
Number of Sequences: 438
Number of extensions: 2378
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)