Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_M23
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical pr...    67   1e-11
AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.    67   1e-11
L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulph...    31   1.0  
Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    30   1.4  
U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF016420-1|AAB65307.2|  310|Caenorhabditis elegans Serpentine re...    28   7.2  
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical
           protein H06O01.1 protein.
          Length = 488

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -2

Query: 686 DVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 516
           +V GFPT+FW PK++   P  YNGGR ++DF+ ++S+ +T  LKG+ R G  K+  E
Sbjct: 431 EVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.
          Length = 488

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -2

Query: 686 DVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 516
           +V GFPT+FW PK++   P  YNGGR ++DF+ ++S+ +T  LKG+ R G  K+  E
Sbjct: 431 EVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical
           protein C14B9.2 protein.
          Length = 618

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 683 VSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELKGWD 546
           V GFPTI++ P     +P +Y+G R LED  K++++      +  D
Sbjct: 571 VEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMTKHGVKSFQKKD 616


>Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical
           protein C14B1.1 protein.
          Length = 485

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 686 DVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 570
           +V G+PTI +     S KP +Y GGRA    + +V +++
Sbjct: 94  EVRGYPTILYF---KSGKPTKYTGGRATAQIVDWVKKKS 129


>U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulphide
           isomerase isoformI protein.
          Length = 485

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 686 DVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 570
           +V G+PTI +     S KP +Y GGRA    + +V +++
Sbjct: 94  EVRGYPTILYF---KSGKPTKYTGGRATAQIVDWVKKKS 129


>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +3

Query: 78  LIYHPQVEVYQYTTYDNTSD-FYKNVYYFLTKRSKML-SYICAPYTESNER*NCVYASVL 251
           LIY P + V +  ++ ++    Y + Y F      M    +  PY  SN   NC   S+L
Sbjct: 199 LIYIPVMIVTRKNSHQHSQQHIYLHEYVFFQSCLVMFFKLVTLPYFLSNLEYNCASTSML 258

Query: 252 FCKSSKVILDLLSVNIMVNECNI 320
               + V+   L + +   +CNI
Sbjct: 259 SMSLADVVTTPLIIQLSYLKCNI 281


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +2

Query: 317 HYYCKRNDNVSVPKECFSYLLSLGQI*HR*TQKSYFIVFHITFILHTNTHADLSWKVLNH 496
           +Y+C  N  ++ P+ C +   S+     R   KS  ++F +TF       + L WKV   
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203

Query: 497 NS 502
           ++
Sbjct: 204 DN 205


>U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical
           protein C46H11.2 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 412 EVIFHCFSHYIHPSHKYTRRSFMESFESQQHAYNSS 519
           +++F C  HY  P++ Y   +F  SF    H Y  S
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF-IHSHDYRHS 165


>AF016420-1|AAB65307.2|  310|Caenorhabditis elegans Serpentine
           receptor, class sx protein11 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 410 QKSYFIVFHITFILHTNTHADLSWKVLN 493
           Q S  IVFH  FILH ++  D S   LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 273 ILDLLSVNIMVNECNITIARGTTMSLYPKNAFHICFPLDRYNTDKLRSHISLFFTLH 443
           I D   V ++ ++C   IA+  T++L  KN   I    D Y  D L+S +  F T H
Sbjct: 298 IADKYEVLMLKDQCERLIAQ--TINL--KNVTQIAMFSDTYTADYLKSAVIRFLTTH 350


>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
           protein C26G2.1 protein.
          Length = 1270

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 84  YHPQVEVYQYTTYDNTSDFYKNVYYFL-TKRSKMLSYIC 197
           YH    +  ++T D  S   KN+Y F+ ++   M  Y C
Sbjct: 270 YHENKRLQSHSTLDTRSKEIKNIYSFIASQNDNMAEYEC 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,333,346
Number of Sequences: 27780
Number of extensions: 356206
Number of successful extensions: 1173
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)