Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_M16
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   252   3e-67
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    39   0.004
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  252 bits (616), Expect = 3e-67
 Identities = 126/228 (55%), Positives = 155/228 (67%)
 Frame = -1

Query: 747 VFTRGDLXEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 568
           VFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQAL IPTKI+
Sbjct: 89  VFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIA 148

Query: 567 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 388
           +GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+  
Sbjct: 149 RGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTT 208

Query: 387 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 208
           E+LR +F +GV NVA++SLA+ YPT+AS  HS+ANG +N+L               IK F
Sbjct: 209 EELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAF 268

Query: 207 IKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 64
           I DPSKF                              SDDDMGFGLFD
Sbjct: 269 IADPSKF----AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = -1

Query: 747 VFTRGDLXEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKI 571
           +FT     EV  +  E   +  AR G +A  +VV+P    +          + L +PTK+
Sbjct: 104 MFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKL 163

Query: 570 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 442
            KG I +     + K G+ +   +A +L    +    + L+ K
Sbjct: 164 DKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 708 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 559
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,064,725
Number of Sequences: 27780
Number of extensions: 328755
Number of successful extensions: 913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)