BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_M07
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 54 2e-07
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 54 2e-07
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 54 2e-07
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 54 2e-07
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 54 2e-07
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 54 2e-07
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 54 2e-07
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 54 2e-07
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 54 2e-07
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 54 2e-07
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 49 4e-06
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 49 4e-06
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 47 2e-05
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 47 2e-05
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 40 0.002
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 34 0.13
AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p pro... 34 0.13
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 34 0.13
AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p pro... 29 5.0
AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein. 29 5.0
AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA... 29 5.0
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 627 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 486 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 483 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 54.0 bits (124), Expect = 2e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 627 KGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -1
Query: 606 GTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 502 GTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -1
Query: 606 GTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 502 GTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -1
Query: 606 GTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 589 GTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -1
Query: 606 GTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 496
GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 589 GTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMADR 490
+GTS +FFT + AK+L+ +LQEA Q + +L +MA R
Sbjct: 626 QGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARR 665
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSM 499
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 854 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p
protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSM 499
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 310 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 346
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 609 KGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSM 499
KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 854 KGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p
protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 354 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 467
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 354 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 467
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA
protein.
Length = 813
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 354 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 467
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,561,955
Number of Sequences: 53049
Number of extensions: 423269
Number of successful extensions: 825
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -