Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_M05
(844 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 326 5e-89
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 326 5e-89
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 326 5e-89
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 326 5e-89
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 326 5e-89
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 47 1e-04
BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein. 31 4.0
BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein. 31 4.0
AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens ... 31 4.0
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 31 4.0
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 31 6.9
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 31 6.9
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 31 6.9
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 31 6.9
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 31 6.9
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 31 6.9
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 326 bits (802), Expect = 5e-89
Identities = 154/215 (71%), Positives = 182/215 (84%)
Frame = -2
Query: 729 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 550
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 549 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 370
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 369 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 190
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 189 EKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 85
EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELH 232
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 46.8 bits (106), Expect = 1e-04
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -2
Query: 165 PLRDVCIRKVKVLKRPRFEISKLMELH 85
PL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELH 27
>BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein.
Length = 533
Score = 31.5 bits (68), Expect = 4.0
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 348 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 172
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 171 IYPLRDVCIRKVKVLKRPRFEISKLMEL 88
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein.
Length = 369
Score = 31.5 bits (68), Expect = 4.0
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 348 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 172
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 171 IYPLRDVCIRKVKVLKRPRFEISKLMEL 88
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23282 fis, clone HEP07626. ).
Length = 538
Score = 31.5 bits (68), Expect = 4.0
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 348 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 172
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 171 IYPLRDVCIRKVKVLKRPRFEISKLMEL 88
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa
1-like protein 1 protein.
Length = 2464
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGSPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2480
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2464
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2448
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2432
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2416
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2400
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = +3
Query: 15 GGSIALRPFRLVSGFPLXLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRC 194
GGS+ P + G L + +RS GASS S H GRP C
Sbjct: 496 GGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGC 555
Query: 195 PWQWSQEST 221
P + E++
Sbjct: 556 PGKARAETS 564
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,086,723
Number of Sequences: 237096
Number of extensions: 2574382
Number of successful extensions: 10622
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10605
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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