Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_M03
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...    89   4e-18
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...    89   4e-18
DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.      36   0.058
AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p pro...    36   0.058
AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA...    36   0.058

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 42/57 (73%), Positives = 49/57 (85%)
 Frame = -1

Query: 738 SIPVTITLQEASGKXVLLLPMGAGDDMAHSQNEKINVRNYIEGIKLFAAYLFEVGKL 568
           SIPVT+TLQEA+GK V+L+P+GA DD AHSQNEKI++ NYIEG KL  AYL EVGKL
Sbjct: 422 SIPVTLTLQEATGKNVILVPVGACDDGAHSQNEKIDIYNYIEGTKLLGAYLHEVGKL 478


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 42/57 (73%), Positives = 49/57 (85%)
 Frame = -1

Query: 738 SIPVTITLQEASGKXVLLLPMGAGDDMAHSQNEKINVRNYIEGIKLFAAYLFEVGKL 568
           SIPVT+TLQEA+GK V+L+P+GA DD AHSQNEKI++ NYIEG KL  AYL EVGKL
Sbjct: 422 SIPVTLTLQEATGKNVILVPVGACDDGAHSQNEKIDIYNYIEGTKLLGAYLHEVGKL 478


>DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.
          Length = 578

 Score = 35.9 bits (79), Expect = 0.058
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 206 YFMSSTLKLQISISFVICPRQRIEKKGQYFFTEFSSGLFSKLLTILYFTA 355
           YF+S  ++ +ISI F I  + R EK  +  +   +  L S LL  + +TA
Sbjct: 163 YFVSVHMRKEISIEFPIVEQSRAEKMRELLYASLAKSLLSSLLPTISYTA 212


>AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p
           protein.
          Length = 578

 Score = 35.9 bits (79), Expect = 0.058
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 206 YFMSSTLKLQISISFVICPRQRIEKKGQYFFTEFSSGLFSKLLTILYFTA 355
           YF+S  ++ +ISI F I  + R EK  +  +   +  L S LL  + +TA
Sbjct: 163 YFVSVHMRKEISIEFPIVEQSRAEKMRELLYASLAKSLLSSLLPTISYTA 212


>AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA
           protein.
          Length = 578

 Score = 35.9 bits (79), Expect = 0.058
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 206 YFMSSTLKLQISISFVICPRQRIEKKGQYFFTEFSSGLFSKLLTILYFTA 355
           YF+S  ++ +ISI F I  + R EK  +  +   +  L S LL  + +TA
Sbjct: 163 YFVSVHMRKEISIEFPIVEQSRAEKMRELLYASLAKSLLSSLLPTISYTA 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,561,652
Number of Sequences: 53049
Number of extensions: 525058
Number of successful extensions: 922
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)