Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_M03
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 84 9e-17
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 79 4e-15
U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying defe... 28 6.0
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 28 6.0
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 28 6.0
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 28 6.0
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 28 6.0
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 28 6.0
AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription... 28 6.0
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 84.2 bits (199), Expect = 9e-17
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = -1
Query: 738 SIPVTITLQEASGKXVLLLPMGAGDDMAHSQNEKINVRNYIEGIKLFAAYLFEVG 574
SIP+T+T QE +GK VLLLP+GA DDMAHSQNEK N+ NY+EG+K AY+ E+G
Sbjct: 417 SIPITLTFQELTGKSVLLLPIGAADDMAHSQNEKNNIWNYVEGVKTLLAYIMELG 471
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/54 (62%), Positives = 46/54 (85%)
Frame = -1
Query: 738 SIPVTITLQEASGKXVLLLPMGAGDDMAHSQNEKINVRNYIEGIKLFAAYLFEV 577
SIPVT+T+Q+ + V+LLP+GA DDMAHSQNEKIN N+++G+K+ AAYLFE+
Sbjct: 416 SIPVTLTIQDLTKSPVMLLPIGASDDMAHSQNEKINRDNFVKGMKVLAAYLFEL 469
>U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying
defective protein 44,isoform e protein.
Length = 239
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 119 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 161
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 220 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 262
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 294 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 336
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 330 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 372
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 337 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 379
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 345 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 387
>AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription
enhancer factor-1-like protein EGL-44 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 209 FMSSTLKLQISISFVICP--RQRIEKKGQYFFTEFSSGLFSKLL 334
F SS K Q+ +S + C Q +EK QYF EF G +S +L
Sbjct: 351 FYSSREKFQLKVSTMACSFGNQAVEKIEQYFPIEF-DGSYSFIL 393
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,122
Number of Sequences: 27780
Number of extensions: 294754
Number of successful extensions: 653
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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