Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_L19
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323...    28   6.0  
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708...    28   7.9  
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572...    28   7.9  

>05_03_0671 +
           16831185-16831254,16832017-16832084,16832318-16832394,
           16832910-16833090,16833192-16833248,16834182-16834256,
           16834820-16834939,16835018-16835224
          Length = 284

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
 Frame = -3

Query: 522 IDVPIFICDYNKSYVRNVYVYQKL-------CKKLCTTLNVLFCKCAKNACY 388
           +D  I + + N+ Y++ VYVY K+         KL    N L   C   ACY
Sbjct: 225 VDDFIDVIEGNRKYIKCVYVYNKIDVVGIDDVDKLARQPNSLVISCNLQACY 276


>09_02_0302 -
           7086017-7086124,7086125-7086796,7087511-7088070,
           7088754-7089131,7089357-7089821,7090022-7090127,
           7090219-7090294,7090407-7090648,7090824-7090904,
           7091013-7091205,7091336-7091558,7091611-7091646,
           7091694-7091790
          Length = 1078

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -3

Query: 477 RNVYVYQKLCKKLCTTLNVLFCKCAKNACYSLV--RKYLCSCKFLLYKFVKMTGFEVTTK 304
           R+  + +++C  L  T++V F   +    +  V  ++  C C F ++ F+++       +
Sbjct: 253 RHEKIRKEVCHALNETMDVDFNFLSWKHEFPKVPRQQNSCDCGFFVFNFMRLWDGHRLIR 312

Query: 303 YFYPSTKIIKKNY 265
           +F   TK ++KN+
Sbjct: 313 WFSTETKELRKNF 325


>07_03_1693 -
           28756331-28756435,28756558-28756664,28757114-28757245,
           28757412-28757478,28757553-28757635,28757824-28757905,
           28763101-28763177,28763278-28763361,28763443-28763512,
           28763625-28763713,28763801-28764487,28765700-28765997
          Length = 626

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 456 KLCKKLCTTLNVLFCKCAKNACYSLVRKYLCSC 358
           K C+ +    + LFC+C   +C +    Y CSC
Sbjct: 509 KSCEDIDECKDKLFCQCKDCSCENTWGSYECSC 541


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,743,676
Number of Sequences: 37544
Number of extensions: 236539
Number of successful extensions: 437
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)