Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_L18
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    27   0.15 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.47 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.47 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 275 SSETLXQRLLGRAASSGRADDNEETIKLR--LKTXLDNNDLVXAQYPDKLRR 126
           +S  +   L G   S+ R  +  +++     L T  DNN++V AQ+ ++L++
Sbjct: 380 ASSRMENNLRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKK 431


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 478  LSEPLLTSALSRSPXXR*VNPYLATILSHCVPFPDPGPPXTHTIG 612
            LSEPLLT  +   P     +   A + S  +      PP TH+ G
Sbjct: 1098 LSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1142


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 478  LSEPLLTSALSRSPXXR*VNPYLATILSHCVPFPDPGPPXTHTIG 612
            LSEPLLT  +   P     +   A + S  +      PP TH+ G
Sbjct: 1094 LSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1138


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 25  GSSXDSRARLTRPAGPGSTVPPTK 96
           G +     R  RPA PG   PPTK
Sbjct: 99  GYTNKMSTRGKRPASPGYVQPPTK 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,684
Number of Sequences: 438
Number of extensions: 2843
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)