Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_L04
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.4  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               20   9.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 160 NKFFT-PYHRYSYYNNIS 110
           N+F + PY++Y Y N I+
Sbjct: 313 NRFSSLPYYKYKYLNVIN 330


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 160 NKFFT-PYHRYSYYNNIS 110
           N+F + PY++Y Y N I+
Sbjct: 313 NRFSSLPYYKYKYLNVIN 330


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 255 YLTHYGCF 278
           YLT+Y CF
Sbjct: 71  YLTNYSCF 78


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 307 KGGRAFCPP 333
           KGG+  CPP
Sbjct: 271 KGGKLACPP 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,905
Number of Sequences: 438
Number of extensions: 965
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)