Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_K15
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 36 0.006
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 33 0.051
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 31 0.16
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.16
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 29 0.63
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 29 0.63
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 29 1.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 1.1
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 28 1.5
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.9
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.6
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 27 3.4
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 27 3.4
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 27 4.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 4.5
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 26 5.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 5.9
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 26 7.8
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 26 7.8
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 7.8
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 26 7.8
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLV 646
K+A ++ EQR+RE E + E++R A+ ++ RK E R+K + E++RK E M+
Sbjct: 257 KRAREEEEQRIREEEARIAEEEKRLAEVEE-ARKEEARLK----KKEKERKKKEEMKAQG 311
Query: 645 DKLQQKIK 622
L +K K
Sbjct: 312 KYLSKKQK 319
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 33.1 bits (72), Expect = 0.051
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = -3
Query: 810 KLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNH----ERMQDLVD 643
K +++ELEN L E++R+ + +K +R+ ++ +KEL Q +K QD++D
Sbjct: 219 KDSNQIQELENLLRKEKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILD 278
Query: 642 KLQQK 628
K+ +
Sbjct: 279 KMNDE 283
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 786 LENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQ 634
L LDG Q + AQ +R+ ++ELT + +E H +M+ VD LQ
Sbjct: 364 LSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEG-VDFLQ 413
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.5 bits (68), Expect = 0.16
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLV 646
K A Q+ + + E+E E +Q R + K + K+L EE+R+ E + L
Sbjct: 563 KVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRRE-AERLA 621
Query: 645 DKLQQKIKTYKRQ 607
++ QK KRQ
Sbjct: 622 EQAAQKALEAKRQ 634
Score = 29.9 bits (64), Expect = 0.48
Identities = 17/72 (23%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENE-LDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDL 649
K+ +KL+++ +E + E + EQR + +K + + ER+ +E + EE+R+ E ++
Sbjct: 669 KEREKKLKKQQQEADREKMAREQRLREEEEKRILE-ERKRREKLDKEEEERRRRELLEKE 727
Query: 648 VDKLQQKIKTYK 613
++ +++++ K
Sbjct: 728 SEEKERRLREAK 739
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 29.5 bits (63), Expect = 0.63
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = -3
Query: 849 EANAXKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKN 670
E + +G +K+ + E++ + L+G+ + AD K + E + + F+ EE+
Sbjct: 52 EESGGEGNEKSEDEFEEKFKN-PYRLEGKFKDEADRAKIMAMTEIERESILFEREEEISK 110
Query: 669 HERMQDLVDKLQQKIKTYKRQ 607
++L +L Q+ Y Q
Sbjct: 111 LMERRELAIRLHQQNAQYMAQ 131
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 825 KKAIQKL-EQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDL 649
+K +Q L E+R L+++ ++RRH D + R + Q D++ H R
Sbjct: 147 QKQLQTLMEKRKYSLDSDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYR 206
Query: 648 VDKLQQKIKTY 616
D+ + +T+
Sbjct: 207 NDRNNWRERTH 217
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -3
Query: 813 QKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQ 634
Q+LEQ EL ++R A+ Q+ + ERR KEL E+++K ER++ L+++ +
Sbjct: 106 QRLEQE--RFNRELLEKKRIEAERQRLKDEEERRKKEL---MEKEKKEKERIR-LIEEQK 159
Query: 633 QKIKTYKR 610
K +R
Sbjct: 160 HKENEQRR 167
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/74 (22%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQ-RRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDL 649
+ A++K+++ L E++ ++ + D + +R+ + R+ EL+ + + QDL
Sbjct: 255 ENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDV-------AQDL 307
Query: 648 VDKLQQKIKTYKRQ 607
+ + + +I T KRQ
Sbjct: 308 LTEKEDEIATLKRQ 321
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/71 (18%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERM-QDL 649
++ I ++ + +E + + +RH + N E+R+KEL Q ++++ + + Q +
Sbjct: 697 EEMIIRMAEEEKEYDRFVSELNQRHETEEWNQEAFEKRLKELKNQKRSEKRDADEVTQVM 756
Query: 648 VDKLQQKIKTY 616
+ + Q+ ++ +
Sbjct: 757 IKECQELLRLF 767
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLV 646
K+ + ++++R +EL+ E + ++ HA+ + R QA+ DR ERM+ L
Sbjct: 42 KRKLDEIKEREKELKREKEEQRAAHAEKIRTRR-----------QAKADR---ERMELLQ 87
Query: 645 DKLQQKIKTYKRQ 607
KL QK+ +R+
Sbjct: 88 AKLHQKVIDRRRR 100
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -3
Query: 810 KLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQ 631
++ +R+ E E+ Q + + + ERRI +L + R N+ER ++L +K+
Sbjct: 841 EISERIPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLKSIRNNNERKRNLQNKISN 900
Query: 630 KIK 622
K
Sbjct: 901 MDK 903
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = -3
Query: 831 GGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQD 652
G +K ++K ++R + + L DA+ N K +R KE+ Q + RK+ +
Sbjct: 62 GAEKVLKKWKKRKKLIAKGL----LEPFDAEDNEAKKMKREKEILRQQRQKRKS--ELTQ 115
Query: 651 LVDKLQQKIKTYKRQ 607
L K+++K K +++
Sbjct: 116 LSQKVKEKFKKMRKK 130
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENE--LDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQD 652
+K K Q + + N+ ++ EQ+ DA+ + K++TF+AEE RK E+ +
Sbjct: 84 EKTTNKPAQLWKAVGNDEVVESEQQDSHDAESIPQFGLLTGKQVTFKAEERRKREEKSSN 143
Query: 651 LVDKLQQK 628
L ++ +K
Sbjct: 144 LDEEELRK 151
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDR---KNHERMQ 655
K+ I KLE+ N L+ +QR+ + + +KEL Q + R + H+R
Sbjct: 41 KQKILKLEEIAASDSNSLNDDQRKALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQF 100
Query: 654 DLVDKLQQK 628
+ + ++K
Sbjct: 101 EATENAKRK 109
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -1
Query: 395 HLGST--WRPKISKRSTTKHKNGL 330
H GST W + RST+KH+N L
Sbjct: 417 HAGSTQEWHSHTTPRSTSKHENNL 440
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 762 QRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
+R A K +K + IKEL A + +R+Q L+ +LQQ+ K Q
Sbjct: 18 ERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQ 69
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = -3
Query: 825 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLV 646
+ ++ +LE+R +L N+L+ Q + LR+ E ++E + + + ++ + L+
Sbjct: 2021 QSSVSRLEERNAQLRNQLEDVQASETQWKFALRRTEHALQEERERVKSLETDFDKYRSLL 2080
Query: 645 D 643
+
Sbjct: 2081 E 2081
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = -3
Query: 819 AIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDK 640
AIQ LE+R R ++ + Q + + + +K+L EE + +++ D
Sbjct: 297 AIQVLEERYRTMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDS 356
Query: 639 LQQKIK 622
L+ +++
Sbjct: 357 LKYQVE 362
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 201 SLKCIYFCLAYKKKRIAYLVFYSFSLIIN----S*CIKSYVFNEK 323
SLK + CL KK+R+A SL IN C++ +V EK
Sbjct: 268 SLKNVVTCLDCKKERVAVDPLMDISLDINEPTLQGCLERFVSKEK 312
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 25.8 bits (54), Expect = 7.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 813 QKLEQRVRELENELDGEQRR-HADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKL 637
Q+ QR REL + + EQRR A K + R+ E + E+ K +++ D+L
Sbjct: 47 QRKLQRERELRQKYEEEQRRQQAMEAKRIAASTRQTSERPPLSAEEAKRIREVKE-KDRL 105
Query: 636 QQK 628
+ K
Sbjct: 106 ESK 108
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 789 ELENELDGEQRRHADAQKNLRKXERR-IKELTFQAEEDRKNHERMQDLVDKLQQKIKTYK 613
E ELD H K +R+ I F EE+ N + +DL+ + Q+I+ +
Sbjct: 435 ESRKELDKHSDWHFRINKRIRESSLHGINRCWFVMEEEWVNSKEEEDLITETAQEIEEQR 494
Query: 612 RQ 607
++
Sbjct: 495 QK 496
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,487,378
Number of Sequences: 5004
Number of extensions: 45292
Number of successful extensions: 232
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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