Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_K15
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 25 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 8.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 8.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 8.2
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = -1
Query: 140 YRGVCIE----SASECVGCTCAREHRRDTPPTSAPH 45
Y G+C E S ++C+GC+ + T PH
Sbjct: 75 YLGICAEGMQCSCNKCIGCSAEKFECSKTSNPCLPH 110
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 86 REHRRDTPPTSAPHTRTCTPRT 21
R+H + P PH TCT T
Sbjct: 1073 RQHTAEGVPEQPPHDTTCTTLT 1094
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = -3
Query: 771 DGEQRRHADAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 607
DGE+ D + +K +RR +L E+ + + +++ K+YK +
Sbjct: 248 DGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNE 302
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 251 IFSILQFFAHHQQ 289
IFS++ F AH QQ
Sbjct: 333 IFSVVGFMAHEQQ 345
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 251 IFSILQFFAHHQQ 289
IFS++ F AH QQ
Sbjct: 386 IFSVVGFMAHEQQ 398
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 8.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 822 KAIQKLEQRVRELENELDGEQRRHADAQKNLRKXERRIKEL 700
K +QK + ++E ENE+D + D K+ ++ EL
Sbjct: 507 KWVQKGQICLKEKENEIDFKIEVTEDCNKSFNDLLTQVAEL 547
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,012
Number of Sequences: 438
Number of extensions: 3547
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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