Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_K03
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 129 9e-30
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 129 9e-30
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 129 9e-30
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 129 9e-30
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 101 3e-21
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 75 2e-13
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 69 2e-11
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 6.0
AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein. 30 7.9
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 129 bits (312), Expect = 9e-30
Identities = 68/149 (45%), Positives = 93/149 (62%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELRENT 576
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++ T
Sbjct: 135 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVT 194
Query: 575 IEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRDIAT 396
I + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +++
Sbjct: 195 ICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPEMSE 251
Query: 395 HAELLVYDWTXXXXXXXXXEDIERLNFDQ 309
E+L Y EDIE L FD+
Sbjct: 252 KCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 129 bits (312), Expect = 9e-30
Identities = 68/149 (45%), Positives = 93/149 (62%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELRENT 576
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++ T
Sbjct: 134 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVT 193
Query: 575 IEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRDIAT 396
I + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +++
Sbjct: 194 ICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPEMSE 250
Query: 395 HAELLVYDWTXXXXXXXXXEDIERLNFDQ 309
E+L Y EDIE L FD+
Sbjct: 251 KCEVLQYSAREAQDSKKVVEDIEYLKFDK 279
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 129 bits (312), Expect = 9e-30
Identities = 68/149 (45%), Positives = 93/149 (62%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELRENT 576
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++ T
Sbjct: 135 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVT 194
Query: 575 IEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRDIAT 396
I + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +++
Sbjct: 195 ICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPEMSE 251
Query: 395 HAELLVYDWTXXXXXXXXXEDIERLNFDQ 309
E+L Y EDIE L FD+
Sbjct: 252 KCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 129 bits (312), Expect = 9e-30
Identities = 68/149 (45%), Positives = 93/149 (62%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELRENT 576
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++ T
Sbjct: 135 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVT 194
Query: 575 IEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALTPAFLTEIEKQYKNKYLRDIAT 396
I + + PHLVIY+D+PV +VQ I+K+ HE+ +T A+L +IE YK +L +++
Sbjct: 195 ICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KITSAYLQDIENAYKKTFLPEMSE 251
Query: 395 HAELLVYDWTXXXXXXXXXEDIERLNFDQ 309
E+L Y EDIE L FD+
Sbjct: 252 KCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 101 bits (242), Expect = 3e-21
Identities = 48/87 (55%), Positives = 63/87 (72%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRSTYYELRENT 576
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K Y E++ T
Sbjct: 140 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVDHYNEVKSVT 199
Query: 575 IEELMRPHLVIYLDLPVSKVQEAIKKR 495
I + + PHLVIY+D+PV +VQ I+K+
Sbjct: 200 ICDYLPPHLVIYIDVPVPEVQRRIQKK 226
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 75.4 bits (177), Expect = 2e-13
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 27/176 (15%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRS---TYY--- 594
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K S T++
Sbjct: 135 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCESALQTHFWTG 194
Query: 593 ------ELRENTIEELM---------RPHLVIYLDLPVSKVQEAIKKRALSH------EV 477
+L + EE++ +P + Y ++ + + + + + E
Sbjct: 195 VAGASGKLESGSSEEVLLINERGGRSKPGVDHYNEVKSVTICDYLPPHLVIYIDVPVPEP 254
Query: 476 TSKALTPAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 309
+T A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 255 HEMKITSAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 310
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = -1
Query: 755 MYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQKFLSKAVRS 603
+Y +R QY DAL HL TGQG+VLERS +SDFVFLEAMY+Q F+ K S
Sbjct: 135 LYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 570 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 466
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 625 GSLSSTSSWYSSSSSRSASRSYSRSWSRSRSRRRS 659
>AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein.
Length = 90
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 570 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 466
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 7 GSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRS 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,495,871
Number of Sequences: 237096
Number of extensions: 2143779
Number of successful extensions: 4605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4600
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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