Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_J24
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 277 5e-75
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 277 5e-75
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 277 5e-75
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 277 5e-75
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 277 5e-75
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 277 5e-75
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 276 9e-75
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 276 9e-75
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 276 9e-75
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 270 6e-73
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 265 2e-71
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 144 7e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 123 1e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 116 1e-26
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 3e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 2e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 2e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.57
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.57
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.57
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.0
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.0
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.0
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 27 9.2
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 27 9.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 259
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 320 DESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 289
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 350 DESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 277 bits (679), Expect = 5e-75
Identities = 127/133 (95%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEALFQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 276 bits (677), Expect = 9e-75
Identities = 126/133 (94%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 276 bits (677), Expect = 9e-75
Identities = 126/133 (94%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 276 bits (677), Expect = 9e-75
Identities = 126/133 (94%), Positives = 131/133 (98%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 270 bits (662), Expect = 6e-73
Identities = 125/133 (93%), Positives = 130/133 (97%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVIT+GNERFRCPEA+FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 265 bits (649), Expect = 2e-71
Identities = 122/133 (91%), Positives = 126/133 (94%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDGQVITIGNERFRCPE LFQP+ +GME GIHETTY SIMKCDVDIRKDLYANTVLSGG
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGG 302
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
T+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 310 DESGPSIVHRKCF 272
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 144 bits (348), Expect = 7e-35
Identities = 66/133 (49%), Positives = 89/133 (66%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGG
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGG 301
Query: 490 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 311
TT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY
Sbjct: 302 TTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEY 361
Query: 310 DESGPSIVHRKCF 272
++ G S +H++ F
Sbjct: 362 EDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 123 bits (297), Expect = 1e-28
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 13/137 (9%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 491
PDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSGG
Sbjct: 247 PDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGG 306
Query: 490 TTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-- 350
TTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 307 TTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMK 366
Query: 349 STFQQMWISKQEYDESG 299
Q W+SK+EY+E G
Sbjct: 367 DRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 116 bits (280), Expect = 1e-26
Identities = 59/140 (42%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Frame = -2
Query: 670 PDGQVITIGNERFRCPEALFQPSXLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANT 506
P+G G ER + PE LF L E + + S D+DIR L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNV 355
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQ 335
++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQ
Sbjct: 356 TVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQ 415
Query: 334 MWISKQEYDESGPSIVHRKC 275
MW+SK EYDESG SIV +KC
Sbjct: 416 MWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99 bits (238), Expect = 1e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -2
Query: 649 IGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 470
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 469 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 314
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 89.0 bits (211), Expect = 3e-18
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Frame = -2
Query: 655 ITIGNERFRCPEALFQPSXLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 479
+ +G ERF PE F P E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 478 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 347
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 346 TFQQMWISKQEYDESGPSI 290
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 655 ITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 476
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 475 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 304 SGPSIVHRKCF*T 266
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 655 ITIGNERFRCPEALFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 476
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 475 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 304 SGPSIVHRKCF*T 266
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 553 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 389
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 388 ----YSVWIGGSILASL-STFQQMWISKQEY 311
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 647 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 534
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 647 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 534
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 647 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 534
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 647 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 534
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 647 RKRKIPLPRGSLPTLVXGYGSLRHPRDHI*LHHEVRRG 534
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 215
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 397 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 236
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 626 PRGSLPTLVXGYGSLRHPRDHI*LHHEVRRGHP 528
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 626 PRGSLPTLVXGYGSLRHPRDHI*LHHEVRRGHP 528
P+G+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,188,780
Number of Sequences: 27780
Number of extensions: 315359
Number of successful extensions: 877
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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