Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_J23
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 37 0.012
U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth... 34 0.11
AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopente... 34 0.11
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 33 0.26
U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78065-9|CAI79172.1| 273|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z78064-11|CAI79210.1| 273|Caenorhabditis elegans Hypothetical p... 28 5.6
Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical pr... 28 5.6
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 5.6
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 5.6
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 28 5.6
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 5.6
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 7.4
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 9.8
U97016-5|AAB52352.1| 196|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 586 AKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKK--QKAPV 413
A + P LYC+ C+ S+ MT H+ K+H EK+ I +K G + +K + P
Sbjct: 65 AASVEP-LYCKACRKSIKSENAMTDHVASKKHKENEKK-IEDDVKKGPKQPRKKPENLPK 122
Query: 412 KQEK-TEKSNDE 380
K E E NDE
Sbjct: 123 KPESLKEPENDE 134
>U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth
rate protein 1 protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 565 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 473
L CEIC SMT + H++GK+H KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422
>AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopentenyl
transferase protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 565 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 473
L CEIC SMT + H++GK+H KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 559 CEICKTSMTCSEQMTMHLNGKRHLTKEKQHI-LKMMKCGSENEKKQK 422
CE+C + E HLN RHL + K+ + ++ S++ +KQ+
Sbjct: 534 CEMCSETFATKEAFLSHLNSARHLQQAKKQLENSLVDLNSQDVEKQR 580
>U29488-7|AAA68771.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.3 protein.
Length = 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -3
Query: 535 TCSEQMTMH-LNGKRHLTKEKQHILKMMKC-GSENEKKQKAPVKQEKTEKSNDETAADCI 362
T +++M + LN KR+ K+ HI ++ G + E + A E TA+ +
Sbjct: 56 TKNKRMALQCLNRKRNFEKQLAHIDGVLSTIGYQREALENASTNAEVLNVMG--TASKAL 113
Query: 361 IVANKAIDVDTAIDLLTQAIDEEDVA 284
A+ +D+D DL+ ++++VA
Sbjct: 114 KAAHNNMDIDQVHDLMEDIAEQQEVA 139
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -1
Query: 285 RKLLMKVQKLLKFQKRLMTKIMR--TMQKKVREKVITVMLVMLRN 157
RK+ V+KL K +KRL+ I R M+K + K T ++LRN
Sbjct: 513 RKIYTVVKKLAKQEKRLLVSIDRIDVMKKDPKHKGYTHRQILLRN 557
>Z78065-9|CAI79172.1| 273|Caenorhabditis elegans Hypothetical
protein F57B1.8 protein.
Length = 273
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 324 MAVSTSIALFATIIQSAAVSSLDFSVFSCFTGAFCFFSFSDPHFIIFRMCCFSL 485
+AV TS+ + +I+ +A++S + ++ FC F S F++ + F L
Sbjct: 155 LAVYTSVIIRMVLIKKSALNSYELTILKQAILIFCPFQISSSVFLLCQTVKFEL 208
>Z78064-11|CAI79210.1| 273|Caenorhabditis elegans Hypothetical
protein F57B1.8 protein.
Length = 273
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 324 MAVSTSIALFATIIQSAAVSSLDFSVFSCFTGAFCFFSFSDPHFIIFRMCCFSL 485
+AV TS+ + +I+ +A++S + ++ FC F S F++ + F L
Sbjct: 155 LAVYTSVIIRMVLIKKSALNSYELTILKQAILIFCPFQISSSVFLLCQTVKFEL 208
>Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical
protein R07E5.5 protein.
Length = 124
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Frame = -3
Query: 559 CEICKTSMTCSEQMTMHLNG------KRHLT--KEKQHILKMMKCGSENEKKQKAPVKQE 404
C++C+ + SE++ H ++ L+ KEK I K ++C E K+ QE
Sbjct: 30 CDLCEKNFKTSEELVEHKKNYPRADVEKALSVYKEKDTIYKCLQCSGEFRLKEDFDYHQE 89
Query: 403 KTEKSND-ETAADCIIVANK--AIDVDTAIDLL 314
++ + ++A+ ANK D+D++ +++
Sbjct: 90 LHKRLGELKSASSNKSEANKDDESDIDSSFEII 122
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform d protein.
Length = 1379
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 547 KTSMTCSEQMTMHLNGKRHLTKEKQ--HILKMMKCGSENEKKQKAPVKQEKTEKSNDETA 374
K + +E T H+N ++ K ++ MM CG EN+K K V + +K+ + A
Sbjct: 1080 KATSANAELTTKHVNTEKGSGKFRELGEEQAMMLCGFENQKSSKEEVTGSRQQKNEIKVA 1139
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 547 KTSMTCSEQMTMHLNGKRHLTKEKQ--HILKMMKCGSENEKKQKAPVKQEKTEKSNDETA 374
K + +E T H+N ++ K ++ MM CG EN+K K V + +K+ + A
Sbjct: 1080 KATSANAELTTKHVNTEKGSGKFRELGEEQAMMLCGFENQKSSKEEVTGSRQQKNEIKVA 1139
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 547 KTSMTCSEQMTMHLNGKRHLTKEKQ--HILKMMKCGSENEKKQKAPVKQEKTEKSNDETA 374
K + +E T H+N ++ K ++ MM CG EN+K K V + +K+ + A
Sbjct: 1080 KATSANAELTTKHVNTEKGSGKFRELGEEQAMMLCGFENQKSSKEEVTGSRQQKNEIKVA 1139
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 547 KTSMTCSEQMTMHLNGKRHLTKEKQ--HILKMMKCGSENEKKQKAPVKQEKTEKSNDETA 374
K + +E T H+N ++ K ++ MM CG EN+K K V + +K+ + A
Sbjct: 1080 KATSANAELTTKHVNTEKGSGKFRELGEEQAMMLCGFENQKSSKEEVTGSRQQKNEIKVA 1139
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 526 EQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCII 359
E+ L R E+QH +++++ E++KK+K +E+ E+ E II
Sbjct: 465 EERARELERVRQEELERQHQMEILRQQEEDQKKKKLEKDREQREQQEAEELNRMII 520
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = -3
Query: 505 NGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTA 326
N +R KE++HI + + +E+ Q K ++ E++ +E A A DT
Sbjct: 381 NLERATQKEREHIERHREAQERHERLQALEAKDKEDERAREEDKAKAREEAKS--KKDTK 438
Query: 325 IDLLTQAIDEEDVAEITDEGSKTAEVSK 242
+ ID + + I + + E K
Sbjct: 439 AEKSKVTIDPKQIVNIPGKVYASQEAKK 466
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 502 GKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDT 329
G++ +K+K+ + KC ++K K E ++++D AA NK +D T
Sbjct: 2247 GEKGKSKDKEKDGEKEKCKDASKKDDVTSEKNELEKRASDAAAATNAPETNKDMDTST 2304
>U97016-5|AAB52352.1| 196|Caenorhabditis elegans Hypothetical
protein B0261.5 protein.
Length = 196
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -3
Query: 499 KRHLTKEKQHILKMMKCGSENEKK---QKAPVKQEKTE---KSNDETAADCIIVANKA 344
+R L +KQ LKM K S+ KK +K+P QE E K++ T C+ A +A
Sbjct: 89 QRSLKAQKQDGLKMEKKASDKRKKKANKKSPRTQETQEVVIKNSKNTDDSCMHTAIRA 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,642,358
Number of Sequences: 27780
Number of extensions: 197604
Number of successful extensions: 919
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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