BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_J22
(413 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071731-1|AAL49353.1| 109|Drosophila melanogaster RH44935p pro... 77 1e-14
AE014298-1595|AAF48031.1| 109|Drosophila melanogaster CG11752-P... 77 1e-14
BT023610-1|AAY85010.1| 128|Drosophila melanogaster IP06419p pro... 27 9.8
AY118863-1|AAM50723.1| 77|Drosophila melanogaster GM24338p pro... 27 9.8
AE014296-692|AAN11570.1| 77|Drosophila melanogaster CG32266-PA... 27 9.8
AE013599-1755|AAF58346.1| 125|Drosophila melanogaster CG12464-P... 27 9.8
>AY071731-1|AAL49353.1| 109|Drosophila melanogaster RH44935p
protein.
Length = 109
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -1
Query: 218 VNGLSSAVIHPASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSALK 39
V GL+S + P+S PVGPG TG YKVPEY+ ++ S+ EAE+EMAKYR PQPSALK
Sbjct: 52 VVGLTSNCVKPSSGPVGPGASA--TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSALK 109
>AE014298-1595|AAF48031.1| 109|Drosophila melanogaster CG11752-PA
protein.
Length = 109
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -1
Query: 218 VNGLSSAVIHPASQPVGPGVDPKKTGAYKVPEYFCYDNVSFFEAEIEMAKYRLPQPSALK 39
V GL+S + P+S PVGPG TG YKVPEY+ ++ S+ EAE+EMAKYR PQPSALK
Sbjct: 52 VVGLTSNCVKPSSGPVGPGASA--TGGYKVPEYYSFNRFSYAEAEVEMAKYRCPQPSALK 109
>BT023610-1|AAY85010.1| 128|Drosophila melanogaster IP06419p
protein.
Length = 128
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 179 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFE 90
+ +GP K+T YK PEY+ Y S++E
Sbjct: 85 EQLGPKAGKKQT--YKNPEYYSYYRYSYYE 112
>AY118863-1|AAM50723.1| 77|Drosophila melanogaster GM24338p
protein.
Length = 77
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 25 ITIYFLRAEGCGNRYFAISISA-SKKLTLS*QKYSGTLYAPVF 150
+ ++ L A CG F + SA S + + YSG LYAP +
Sbjct: 7 LCLFALLAVACGKPQFLTAYSAASPVVAATPYAYSGGLYAPTY 49
>AE014296-692|AAN11570.1| 77|Drosophila melanogaster CG32266-PA
protein.
Length = 77
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 25 ITIYFLRAEGCGNRYFAISISA-SKKLTLS*QKYSGTLYAPVF 150
+ ++ L A CG F + SA S + + YSG LYAP +
Sbjct: 7 LCLFALLAVACGKPQFLTAYSAASPVVAATPYAYSGGLYAPTY 49
>AE013599-1755|AAF58346.1| 125|Drosophila melanogaster CG12464-PA
protein.
Length = 125
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 179 QPVGPGVDPKKTGAYKVPEYFCYDNVSFFE 90
+ +GP K+T YK PEY+ Y S++E
Sbjct: 82 EQLGPKAGKKQT--YKNPEYYSYYRYSYYE 109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,938,828
Number of Sequences: 53049
Number of extensions: 373881
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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