Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_J14
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81507-2|CAB04135.1|  388|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z70752-4|CAA94756.2|  363|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z70308-9|CAA94346.2|  402|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AF039046-6|AAB94216.1|   66|Caenorhabditis elegans Caenacin (cae...    26   8.1  

>Z81507-2|CAB04135.1|  388|Caenorhabditis elegans Hypothetical
           protein F18A11.2 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 367 DESDNKLWRRMTVNCE 320
           D  D  LWR MTV CE
Sbjct: 313 DTKDMDLWREMTVGCE 328


>Z70752-4|CAA94756.2|  363|Caenorhabditis elegans Hypothetical
           protein F25B3.4 protein.
          Length = 363

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +3

Query: 6   IIFANKIIFPLHYVLLLSSPIRALSSVRWGNLPFFPPSKEKCSDRHNR 149
           ++FA K+IFP H+ +L  +   +L + ++G   F+    E+C  R+N+
Sbjct: 155 LLFAYKVIFPNHFFMLRGNHECSLINRQYG---FY----EECQRRYNK 195


>Z70308-9|CAA94346.2|  402|Caenorhabditis elegans Hypothetical
           protein F49E11.7 protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 3   SIIFANKIIFPLHYVLL 53
           S++FA K+++P +Y+LL
Sbjct: 135 SLVFALKVVYPTNYILL 151


>AF039046-6|AAB94216.1|   66|Caenorhabditis elegans Caenacin
           (caenorhabditis bacteriocin)protein 4 protein.
          Length = 66

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 36  LHYVLLLSSPIRALSSVRWGNLPF 107
           L Y+L+L   I A+SS +WG  P+
Sbjct: 2   LRYILVLLVAIIAMSSAQWGYGPY 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,524,573
Number of Sequences: 27780
Number of extensions: 187656
Number of successful extensions: 494
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)