Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_J12
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 146 1e-35
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 140 9e-34
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 122 3e-28
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 108 4e-24
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 64 1e-10
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.067
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 31 1.4
09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052... 30 1.9
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 5.8
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 146 bits (355), Expect = 1e-35
Identities = 85/252 (33%), Positives = 133/252 (52%), Gaps = 2/252 (0%)
Frame = -3
Query: 807 DDIMDGSSVXRGMPLLVSASGSGHHMRLXRLSFDTQFFI*IXXTNFRTNPNYMKMFELFN 628
DDIMD S RG P G + I +F+ Y+ + +LFN
Sbjct: 126 DDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISR-ILQRHFKGKLYYVDLIDLFN 184
Query: 627 ETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENV 454
E ++T+ GQ LD +T + + D + + L + LPV+ LLL+ EN+
Sbjct: 185 EVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLSGENL 244
Query: 453 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTE 274
D + ++I +E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E
Sbjct: 245 DN--FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADE 302
Query: 273 AQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVL 94
Q+ + YG +P V ++K LY++L+L ++ E+ Y+ +I IE P +A + +
Sbjct: 303 NQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNV 362
Query: 93 FKKLLDITYNRQ 58
K L Y RQ
Sbjct: 363 LKSFLHKIYKRQ 374
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 140 bits (340), Expect = 9e-34
Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Frame = -3
Query: 675 NFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXX 499
+FR Y + +LFNE ++T+ GQ LD +T + + D + + +
Sbjct: 135 HFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYS 194
Query: 498 YNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQER 319
+ LPV+ LLL+ D Y + +DI +++G FQ+QDD++DC+GD GK+GTDI++
Sbjct: 195 FYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGKIGTDIEDY 253
Query: 318 KCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNI 139
KC+WL VQAL+R E+Q++V YG +PA V ++K LY +L+L ++ E Y +
Sbjct: 254 KCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRELNLEAVFLDYENESYKKL 313
Query: 138 IRQIENIPIEAARVLFKKLLDITYNRQ 58
I IE P A + + K L Y RQ
Sbjct: 314 IADIEAQPSIAVQNVLKSFLHKIYKRQ 340
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 122 bits (295), Expect = 3e-28
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Frame = -3
Query: 672 FRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKT-DYSSFTLDRXXXXXXXXXXXXXY 496
F+ ++ + EL+NE +T+MGQ LD +T + D + + + +
Sbjct: 202 FKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSF 261
Query: 495 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 316
LPV+ LLL Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ K
Sbjct: 262 YLPVACALLL-NGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYK 320
Query: 315 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 136
C+WL VQA++ E + + YG S+P V +K +Y +L L I+ E +Y +++
Sbjct: 321 CSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLV 380
Query: 135 RQIENIPIEAARVLFKKLLDITYNRQ 58
I+ A R + K L Y R+
Sbjct: 381 STIDAETDRAIRDILKSFLKKIYRRK 406
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 108 bits (260), Expect = 4e-24
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Frame = -3
Query: 672 FRTNPNYMKMFELFNETLWRTSMGQHLDHV-TGNRKTDYSSFTLDRXXXXXXXXXXXXXY 496
FR P ++ + E+++E +TS+GQ LD + T D + ++++ +
Sbjct: 214 FREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSF 273
Query: 495 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 316
LPV+ LLL+ E + +DI +E+G FQIQDD++DCF D GK+GTDI++ K
Sbjct: 274 YLPVANALLLSGAKLED-FSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHK 332
Query: 315 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHL--------------PQ 178
C+WL VQAL Q V YG + + V +KR Y L L PQ
Sbjct: 333 CSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEVKRTYAALDLKIWAIDLADCEFCPPQ 392
Query: 177 -IYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNRQ 58
I+ E+ Y++++ IE AAR + L + R+
Sbjct: 393 DIFSEFERRCYNHLVTSIEAQKDHAAREILISFLKKIHQRK 433
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 64.5 bits (150), Expect = 1e-10
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = -3
Query: 807 DDIMDGSSVXRGMPLLVSASGSGHHMRLXRLSFDTQFFI*IXXTNFRTNPNYMKMFELFN 628
DDIMD S RG P G L +Q I FR Y+ + +LFN
Sbjct: 90 DDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISR-IFRRYFRGKSYYVDLLDLFN 148
Query: 627 ETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA-ENVD 451
E +T+ GQ LD +T N L++ + LPV+ LLL E++D
Sbjct: 149 EVEIQTTSGQLLDQITTNEGRK----DLNKYRRIVEYKTAYYSFYLPVACALLLFDESLD 204
Query: 450 EKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 343
Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 205 N--YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = -3
Query: 282 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 103
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 102 RVLFKKLLDITYNR 61
R + K L Y R
Sbjct: 289 RAVLKSFLHKIYKR 302
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -3
Query: 486 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 310
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 309 WLAVQALQRCTE 274
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 649 HIIRIGPEISXXNSNKELCIKRESXKAHVMPTSGRRYQQGHA 774
+++ + S NS + +C++R + KA V T R+Y HA
Sbjct: 118 YLLAVATNSSIGNSTRHICLRRFACKASVKLTDPRKYFVQHA 159
>09_04_0692 +
19502878-19502920,19505011-19505104,19505196-19505227,
19505833-19506074,19506758-19506994,19508283-19508396
Length = 253
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 88 FKENAGGLYWYIFNLSYNIVVH 153
F++ GG+YWY F YN+V+H
Sbjct: 231 FRDFTGGMYWYAF--IYNVVLH 250
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -3
Query: 480 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 301
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 300 VQALQRCTEA 271
+ + TE+
Sbjct: 275 LTKVGDHTES 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,836,959
Number of Sequences: 37544
Number of extensions: 402653
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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