Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_J09
         (349 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0004 - 59511-59576,59749-59806,60101-60144,60455-60512,608...    27   5.3  

>06_01_0004 -
          59511-59576,59749-59806,60101-60144,60455-60512,
          60810-60867,61165-61222,61871-61928,62225-62282,
          62579-62636,62933-62990,63285-63328,63639-63696,
          64699-64742,65053-65110,65407-65464,66114-66171,
          66468-66818,68051-68108,68405-68462,68759-68816,
          69113-69170,69466-69509,69820-70170,71048-71091,
          71755-71812,72109-72291,72463-72520,72815-72858,
          73877-73920,74584-74641,74938-74995,75292-75349,
          75643-75700,75997-76179,76351-76408,76702-76745,
          77056-77238,77410-77467,77766-77823,78120-78177,
          78473-78530,78826-78869,79180-79362,79534-79591,
          79885-79942,80239-80296,80592-80649,80946-81003,
          81652-81709,82361-82440,83067-83124,83421-83603,
          84127-84184,84480-84537,85188-85245,85541-85598,
          85895-85950
          Length = 1472

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 73 LKYFTFKLNYTCFVEXLV 20
          L+Y TF+ NY CFV  +V
Sbjct: 42 LRYSTFRRNYRCFVAYVV 59



 Score = 25.8 bits (54), Expect = 9.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 73  LKYFTFKLNYTCFVEXLVLNI 11
           L+Y TF+ NY CFV  +  ++
Sbjct: 161 LRYSTFRRNYRCFVAYVTTSL 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,400,514
Number of Sequences: 37544
Number of extensions: 64953
Number of successful extensions: 106
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)