Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_J04
         (745 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz...    27   2.1  
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ...    27   3.7  
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ...    26   6.5  
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    25   8.6  
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||...    25   8.6  

>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 20/84 (23%), Positives = 34/84 (40%)
 Frame = +3

Query: 285 YDYSQHNL*KLQKIGQLNIPQIKSSFKRTKYFSSMNLVTFICFTISAGV*LFNQQFNNHM 464
           Y+ S   L  +  + +   P  K S    KYF S   +  IC+ IS+G+   +     H 
Sbjct: 448 YNESFWYLNNIWSVFEYKDPSTKLSALIPKYFFSELNIASICYEISSGLAFLHNSGIAHH 507

Query: 465 QV*ADSTLLHHFDFFKLTNYSLQT 536
            +  +   L      K+ NY+  +
Sbjct: 508 NLTTECIYLTKSSCLKIGNYAFSS 531


>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 337

 Score = 26.6 bits (56), Expect = 3.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 451 NCWLNNHTPAEIVKHMNVTKFMLEKY 374
           N W+++ T  E+  HM+  + +LE Y
Sbjct: 227 NSWVDSQTAQELASHMDRDEILLEGY 252


>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1877

 Score = 25.8 bits (54), Expect = 6.5
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -1

Query: 496  WCSNVESAYTCMWLLNCWLNNHTPAEIVKHMNVTKFMLEKYFVLLKLDLICGMLSCPIFC 317
            W  + ++A   +  +   L   T  E+  ++NV    L   FV   L +   +L+ P+  
Sbjct: 1154 WYGDRQTAKLIVHFMKFVLKKITSMEV--NLNVLTRELHFKFVSFGLRIAENLLNSPLGS 1211

Query: 316  NFYKLCCE*S*C 281
             FY LC +   C
Sbjct: 1212 RFYNLCVDAGLC 1223


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 25.4 bits (53), Expect = 8.6
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 265 IY*DKRIMTIHNIIYKNYKKLGSSTYHKSSQVLKE 369
           +Y +K +  ++++   +YKKLG+  Y+  +Q LK+
Sbjct: 707 VYDEKDVKRVNSLRGTSYKKLGNQ-YYNDTQWLKD 740


>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 709

 Score = 25.4 bits (53), Expect = 8.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 442 LNNHTPAEIVKHMNVTKFMLEK 377
           +NN T  E+V    VTK M+EK
Sbjct: 469 VNNETITEMVSEFTVTKDMIEK 490


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,635,231
Number of Sequences: 5004
Number of extensions: 50185
Number of successful extensions: 103
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)