Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_I23
(323 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 30 1.8
AY049732-1|AAL12169.1| 1210|Homo sapiens ARAP1 protein. 30 1.8
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 30 1.8
AF411983-1|AAL04167.1| 1136|Homo sapiens centaurin delta2 protein. 30 1.8
AB018325-1|BAA34502.2| 1281|Homo sapiens KIAA0782 protein protein. 30 1.8
U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein. 28 5.6
BC054500-1|AAH54500.1| 862|Homo sapiens sema domain, immunoglob... 28 5.6
AL929575-4|CAI43250.2| 862|Homo sapiens sema domain, immunoglob... 28 5.6
AL590233-3|CAI17379.2| 862|Homo sapiens sema domain, immunoglob... 28 5.6
AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein ... 28 5.6
BC056401-1|AAH56401.1| 679|Homo sapiens CENTD2 protein protein. 28 7.4
BC008315-1|AAH08315.1| 595|Homo sapiens Unknown (protein for IM... 28 7.4
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 28 7.4
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RSQ+
Sbjct: 1299 FHDRYFILNSSCLRLYKEVRSQR 1321
>AY049732-1|AAL12169.1| 1210|Homo sapiens ARAP1 protein.
Length = 1210
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RSQ+
Sbjct: 1059 FHDRYFILNSSCLRLYKEVRSQR 1081
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RSQ+
Sbjct: 1299 FHDRYFILNSSCLRLYKEVRSQR 1321
>AF411983-1|AAL04167.1| 1136|Homo sapiens centaurin delta2 protein.
Length = 1136
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RSQ+
Sbjct: 985 FHDRYFILNSSCLRLYKEVRSQR 1007
>AB018325-1|BAA34502.2| 1281|Homo sapiens KIAA0782 protein protein.
Length = 1281
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RSQ+
Sbjct: 1130 FHDRYFILNSSCLRLYKEVRSQR 1152
>U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein.
Length = 862
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 CIRIYKSQRSQKSTINQTSC-ISLCPDDVIGSYKIHY 318
C+ +++++ + I + S S+CPD GSY+ H+
Sbjct: 529 CVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHF 565
>BC054500-1|AAH54500.1| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 CIRIYKSQRSQKSTINQTSC-ISLCPDDVIGSYKIHY 318
C+ +++++ + I + S S+CPD GSY+ H+
Sbjct: 529 CVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHF 565
>AL929575-4|CAI43250.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 CIRIYKSQRSQKSTINQTSC-ISLCPDDVIGSYKIHY 318
C+ +++++ + I + S S+CPD GSY+ H+
Sbjct: 529 CVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHF 565
>AL590233-3|CAI17379.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 CIRIYKSQRSQKSTINQTSC-ISLCPDDVIGSYKIHY 318
C+ +++++ + I + S S+CPD GSY+ H+
Sbjct: 529 CVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHF 565
>AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein
protein.
Length = 870
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 211 CIRIYKSQRSQKSTINQTSC-ISLCPDDVIGSYKIHY 318
C+ +++++ + I + S S+CPD GSY+ H+
Sbjct: 537 CVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHF 573
>BC056401-1|AAH56401.1| 679|Homo sapiens CENTD2 protein protein.
Length = 679
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RS +
Sbjct: 539 FHDRYFILNSSCLRLYKEVRSHR 561
>BC008315-1|AAH08315.1| 595|Homo sapiens Unknown (protein for
IMAGE:3161752) protein.
Length = 595
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RS +
Sbjct: 455 FHDRYFILNSSCLRLYKEVRSHR 477
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform a
variant protein.
Length = 1474
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 178 YKNNYYFINNLCIRIYKSQRSQK 246
+ + Y+ +N+ C+R+YK RS +
Sbjct: 1334 FHDRYFILNSSCLRLYKEVRSHR 1356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,705,028
Number of Sequences: 237096
Number of extensions: 618789
Number of successful extensions: 827
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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