Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_I17
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 218 3e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 218 3e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 218 3e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 218 3e-57
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 218 3e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 218 3e-57
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 218 3e-57
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 218 3e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 218 3e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 212 2e-55
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 207 4e-54
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 116 1e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 8e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 77 1e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 54 6e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82260-11|CAB05139.1| 359|Caenorhabditis elegans Hypothetical p... 29 3.5
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEA+FQPSF G
Sbjct: 257 RCPEAMFQPSFLG 269
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 257 RCPEALFQPSFLG 269
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEA+FQPSF G
Sbjct: 257 RCPEAMFQPSFLG 269
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 257 RCPEALFQPSFLG 269
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 257 RCPEALFQPSFLG 269
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEA+FQPSF G
Sbjct: 257 RCPEAMFQPSFLG 269
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 221 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 278
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 213 RCPEALFQPSFLG 225
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 251 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 308
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 243 RCPEALFQPSFLG 255
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 218 bits (532), Expect = 3e-57
Identities = 102/114 (89%), Positives = 107/114 (93%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEALFQPSF G
Sbjct: 257 RCPEALFQPSFLG 269
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 212 bits (517), Expect = 2e-55
Identities = 101/114 (88%), Positives = 106/114 (92%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
P+FL ES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALA
Sbjct: 265 PSFLGM--ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
P T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 323 P-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPEA+FQPSF G
Sbjct: 257 RCPEAMFQPSFLG 269
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 207 bits (506), Expect = 4e-54
Identities = 97/114 (85%), Positives = 103/114 (90%)
Frame = -2
Query: 591 PAFLSWVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 412
PAF+ E GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LA
Sbjct: 264 PAFIGM--EGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLA 321
Query: 411 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
PST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 611 RCPEALFQPSFPG 573
RCPE LFQP+F G
Sbjct: 256 RCPEVLFQPAFIG 268
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 116 bits (280), Expect = 1e-26
Identities = 51/103 (49%), Positives = 73/103 (70%)
Frame = -2
Query: 558 GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 379
G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I A
Sbjct: 272 GMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISAS 331
Query: 378 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 250
ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 332 QERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (256), Expect = 8e-24
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = -2
Query: 519 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIG 349
D+DIR L++N ++GG ++ G +R+ + P TIK+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 348 GSILASLSTFQQMWISKEEYDESGPGIVHRKC 253
GSIL SL TFQQMW+SK EYDESG IV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 89.8 bits (213), Expect = 1e-18
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Frame = -2
Query: 567 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL--------- 415
E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 274 EKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGN 333
Query: 414 --APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 277
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 334 TDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 81.8 bits (193), Expect = 4e-16
Identities = 31/95 (32%), Positives = 64/95 (67%)
Frame = -2
Query: 576 WVWESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIK 397
W ++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI
Sbjct: 445 WGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIH 504
Query: 396 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 292
++ P R + ++G I+AS STF+ IS ++
Sbjct: 505 TQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Frame = -2
Query: 555 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA------------ 412
I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSG 362
Query: 411 ----PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 268
P I +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = -2
Query: 567 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 388
+ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 285 DQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
Query: 387 ---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 268
+ P+ W G L L+ + WI+++++DE G +
Sbjct: 345 SNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = -2
Query: 567 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 388
+ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 285 DQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
Query: 387 ---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 268
+ P+ W G L L+ + WI+++++DE G +
Sbjct: 345 SNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -2
Query: 543 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 379
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 378 PERK----YSVWIGGSILASL-STFQQMWISKEEY 289
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 556 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 413
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>Z82260-11|CAB05139.1| 359|Caenorhabditis elegans Hypothetical
protein C32H11.13 protein.
Length = 359
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 92 NLISFLFLLYXTGSLWIS 39
N IS LFLLY TG W+S
Sbjct: 215 NYISNLFLLYQTGKQWVS 232
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 457 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 359
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -1
Query: 532 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 353
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 352 RWIHPG 335
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,529,147
Number of Sequences: 27780
Number of extensions: 245780
Number of successful extensions: 752
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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