Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_I16
(688 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 48 2e-06
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 39 8e-04
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 34 0.017
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 34 0.022
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 34 0.022
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.029
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 31 0.16
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.21
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 30 0.36
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.63
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 29 0.63
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.63
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.5
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.5
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 2.5
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 2.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 3.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 3.4
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 27 3.4
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.4
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 3.4
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.4
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 5.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 5.9
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 7.8
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 47.6 bits (108), Expect = 2e-06
Identities = 27/119 (22%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = -2
Query: 681 RSGTAXQKLLEAQQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDAD---GK 511
R+ A KL E + + + L +++ E ++++L + K+ RL A++ D +
Sbjct: 21 RAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTE 80
Query: 510 SDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 334
++++SRK+ +E+ELE + ++ K+ + + + + ++SLE + Q++EE
Sbjct: 81 AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Frame = -2
Query: 579 ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEE-- 406
E+++ + EA AE A+ K EV +L+ E E E + ++ ++++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 405 ---LKVVGNSLKSLEVSE-----EKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKK 250
LK ++ E + E + +E + E+ V+
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125
Query: 249 LQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 151
L++E D +E +L D+Y + E+D L
Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELDEVHQAL 158
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 38.7 bits (86), Expect = 8e-04
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Frame = -2
Query: 648 AQQSADENNRMCKVL-EXRAQQDE------ERMDQLTNQLKEARLLAEDADGKSDEVSRK 490
+ Q DE + K L + Q+D+ ER++ LT + + A+D++GK VS++
Sbjct: 142 SSQEKDELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKR 201
Query: 489 LAFVED---ELEVAEDRVKSGDAKISELEEELKV----VGNSLKSLEVSEEKANQR 343
A +E+ +L + E+ + + K++ E++LK + N L +E E+ N+R
Sbjct: 202 EAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNER 257
Score = 31.9 bits (69), Expect = 0.089
Identities = 23/102 (22%), Positives = 47/102 (46%)
Frame = -2
Query: 639 SADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEV 460
+AD++ ++ R EE +L + E +GK D++ ++ +E+ L
Sbjct: 187 NADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLK 246
Query: 459 AEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 334
E+ KS + + ++L E + N K E E+ A ++ +E
Sbjct: 247 VEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKE 288
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 34.3 bits (75), Expect = 0.017
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Frame = -2
Query: 660 KLLEAQQSADENNRMCKVLEX--RAQQDEERMDQLTNQLKEARLLAEDADG----KSDEV 499
K LE E +R LE R+Q+D++ + +E RLL E A KS EV
Sbjct: 529 KNLELADMILERDRARHELETMHRSQRDKQESTE-----RELRLLQEKAASLERNKSSEV 583
Query: 498 SRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 355
S L+ E+ ED + S D +++ L ELK N + L +E+
Sbjct: 584 SNLLSRYNTEVAHLEDALHSKDRELANLGVELKSTENRYRQLLQEKEE 631
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.9 bits (74), Expect = 0.022
Identities = 23/102 (22%), Positives = 50/102 (49%)
Frame = -2
Query: 651 EAQQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED 472
EA++ ++ + + E +E +++LT+++ + D + DE+ ++L +E+
Sbjct: 575 EAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEE 634
Query: 471 ELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 346
E A++ +K S L E+LK+ + SL E+ Q
Sbjct: 635 ENNKAKE---DSTSKTSNLLEQLKMTEAEVDSLRKENEENKQ 673
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 33.9 bits (74), Expect = 0.022
Identities = 24/106 (22%), Positives = 45/106 (42%)
Frame = -2
Query: 687 EERSGTAXQKLLEAQQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKS 508
+ER L E Q A E + + + R + ER+ L NQ+ A E +
Sbjct: 866 KERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIADEKYEFLYAEK 925
Query: 507 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLE 370
+ LA + E+ D + + K+S ++++ + + + K LE
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELE 971
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.5 bits (73), Expect = 0.029
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -2
Query: 645 QQSADENNRMCKVLEXRAQQDE---ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVE 475
+Q +E N + LE +E E L N+L + + D+D + L V
Sbjct: 1147 EQLTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVN 1206
Query: 474 DELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 355
DEL+ + S + SE+ ++ + +SLK E S K
Sbjct: 1207 DELDTLKKDKDSLSTQYSEVCQDRDDLLDSLKGCEESFNK 1246
Score = 27.1 bits (57), Expect = 2.5
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 11/161 (6%)
Frame = -2
Query: 603 EXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAF----VEDELEVA---EDRV 445
E QQ+ +D + +L + E + EV+ KL+ + L VA D++
Sbjct: 825 ENLTQQNMTLIDNV-QKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDNDQI 883
Query: 444 KSGDAKISE----LEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXX 277
+ A++S+ LE+E + + LKSLE ++ + EE K
Sbjct: 884 LTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKS 943
Query: 276 XXXEKTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 154
K + Q+E+ L++E S+ ++D T ++
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSK 984
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.16
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = -2
Query: 660 KLLEAQQSADENNRMCKVLEXRAQQDEERMDQ-----LTNQLKEARLLAEDADGKSDEVS 496
++L A ++ N ++ + ++ EER+ + LT L+E+ E D K +++
Sbjct: 438 RMLLADADSEMMNLEYEIRQQMTREMEERVSEVERTFLTKLLEESAQGIEYTDQKLEKMG 497
Query: 495 RKLAFVEDELEVAEDRVKSGDAKISELEEELK-VVGNSLKSLEVSEEKANQ 346
+ ++DE + + + I EL EEL+ + S+K +++ NQ
Sbjct: 498 GWMKKLQDENSEKTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQ 548
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.21
Identities = 22/113 (19%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = -2
Query: 663 QKLLEAQQSADENNRMCKVLEXRA-QQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 487
+KLL+ + + ++E + Q+ R++QLTN+L+ + ++ + + K +E L
Sbjct: 641 EKLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSL 700
Query: 486 AFVEDELEVAEDRVKSGDA----KISELEEELKVVGNSLKSLEVSEEKANQRV 340
+ +++ + S + K+++LE+ L + S L+ S + +++
Sbjct: 701 QLEKSNIQLQLTSLTSERSLALEKLNDLEKSLVLSERSKDELDESYKSLQEQL 753
Score = 30.3 bits (65), Expect = 0.27
Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Frame = -2
Query: 606 LEXRAQQDEERMDQLTNQLKEARLLAEDADGKSD--EVSRKLAFVEDELEVAEDRVKSGD 433
L+ ++ E+ + N+L+ + A DADGK++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 432 AKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVK 253
A+++ L E G SLE ++E A R + + + V
Sbjct: 1549 AELAALREHSPTQG----SLENADEIARLRSQ---LESTKQYYEKEKETEILAARSELVA 1601
Query: 252 KLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 154
+ +K + LE++L R K L ++ +E
Sbjct: 1602 EKEKTKEELENQLNEKSQRIKELEEQAQKNSSE 1634
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.36
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = -2
Query: 501 VSRKLAFVEDEL-------EVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQR 343
+ R+L VEDEL V + R + + +IS+L + L+ N+++ L++ EK+ ++
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKK 578
Query: 342 VEE 334
E+
Sbjct: 579 NED 581
Score = 29.1 bits (62), Expect = 0.63
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Frame = -2
Query: 660 KLLEAQQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGK----SDEVSR 493
KL+EA + +N ++ ++L+ + +E D +TNQ + A A + + E R
Sbjct: 625 KLIEANE---KNYKLTQLLKTQ----KEDADFITNQYQNASTFAAEQSKEVAKLQAECKR 677
Query: 492 KLAF---VEDELEVAED-RVKSGDAKISELEEELKVV 394
A V +E++V D RV++ AK+S LEE LK++
Sbjct: 678 LQAINSKVMEEVKVYNDSRVEALLAKVSSLEETLKIL 714
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 501 VSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 340
VSR + + E+ E +K +SELE EL+ S L++ EK +++
Sbjct: 728 VSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKI 781
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -2
Query: 456 EDRVKSGDAKISELEEELKVVGNSLKSLEV---SEEKANQR 343
E+R+K+ DA I EE+ K + ++++SLE+ EKAN++
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEMIINVLEKANEK 87
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 0.63
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 561 TNQLKEARLLAEDADG---KSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVG 391
+N L E L E+ +G K D ++++ + +ELE R+KS + +SEL +
Sbjct: 516 SNDLNEIHDLREENEGLTLKIDSITKEKDRLINELE---QRIKSYEVNVSELNGTIDEYR 572
Query: 390 NSLKSLE 370
N LK E
Sbjct: 573 NKLKDKE 579
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = -2
Query: 519 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 340
+ + + V R L E++L++ + + ++ + E+ N L+SLE + + R+
Sbjct: 844 ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRI 903
Query: 339 EE 334
E+
Sbjct: 904 EQ 905
Score = 27.5 bits (58), Expect = 1.9
Identities = 23/97 (23%), Positives = 46/97 (47%)
Frame = -2
Query: 630 ENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAED 451
E N ++L QQ++E TN +K L + +S ++SR++ F + + +
Sbjct: 276 ELNHSLELLRVEKQQNDE---DYTNIMKSKVAL----ELQSSQLSRQIEFSKKDESSKLN 328
Query: 450 RVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 340
+ ++KISE E EL + ++ + N+R+
Sbjct: 329 ILSELESKISEKENELSEILPKYNAIVSEADDLNKRI 365
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/84 (21%), Positives = 35/84 (41%)
Frame = -2
Query: 420 ELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQK 241
E+E ELK + K +E+S E R+ + + + KL+
Sbjct: 422 EMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKS 481
Query: 240 EVDRLEDELGINKDRYKSLADEMD 169
++ ++D+L ++ K+L MD
Sbjct: 482 SIENVKDDLSRSE---KALGTTMD 502
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = -2
Query: 687 EERSGTAXQKLLEAQQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKS 508
E+RS + +L D L+ Q + +D+ ++L+E D +
Sbjct: 966 EQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSI 1025
Query: 507 DEVSRKLAFVEDELE-VAEDRVKSGDAKISELEEELKVVGNS 385
DE+ + + F ++ V +R++ + +I E L VGN+
Sbjct: 1026 DELVKFIEFESKQMNSVKAERIEL-ENQIQEQRTALSEVGNN 1066
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = -2
Query: 645 QQSADENNRMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDEL 466
++S++E + E ++ E ++ K+A +ED++ S+ + +E
Sbjct: 40 EESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEED 99
Query: 465 EVAEDRVKSGDAKISELEEE 406
D +S SE EEE
Sbjct: 100 SEVSDESESESESESESEEE 119
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 477 EDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 340
E E E A K D+K S++EEE + ++ E+ EEK N+ +
Sbjct: 15 ETESESANGDTKQDDSKKSQVEEE----EDGIEESELGEEKDNKTI 56
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 582 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVK 442
+ER+D LTN L E LL E K DE ++ ++L+ E R K
Sbjct: 224 QERLDILTNLLDELTLLYE--TDKFDETMKEAILSFEDLKEQEIRRK 268
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -3
Query: 584 TRSVWTSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 417
T VW+++ PVS+P T + + F ++P+ + S S SS S S
Sbjct: 122 TAPVWSNTSV----PVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYS 173
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 3.4
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = -2
Query: 663 QKLLEAQQSADENN-RMCKVLEXRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKL 487
+K ++ S DE + R K + ++ + +D L + + + E+ D D R
Sbjct: 14 EKYVDQDLSEDEEDERFLKAIRS-SRSTKPVVDVLKVKSESSADELEERDAHLDRFRRDS 72
Query: 486 AFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSE-EKANQRVE 337
F E E ++ SG ++ +EL+EE NS+K + + E EK + ++
Sbjct: 73 TF---ESETSDHEDFSGGSE-NELDEETTKNANSIKKISLEEVEKQRKAIK 119
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = -2
Query: 567 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 388
+L + +EA ++ + + D K +E+ E + ++K+ + + LEE K +
Sbjct: 166 ELAKKFEEASQISNKLEKEKDATGSKS--IEELWEEHQKQLKNAGLEPASLEEYQKQWED 223
Query: 387 SLKSLEVSEEKANQRVEEF 331
LKS +S++ V F
Sbjct: 224 FLKSNNISDDPYTSSVNSF 242
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 515 ENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 369
EN R ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 7 ENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 599 TGHSRTRSVWTSSPTN*KRPVSSPRTLTENP-TRFRENWPSLKTNSKSPKTVSS 441
+G RT+S+ SP ++P T + P T +E+W + S ++ ++
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESWTNQGIKSSQQRSANA 459
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 519 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 340
+ K + +S K A E E ++ K K EEE V + E E+K N V
Sbjct: 7 NNKDESISTKNALEEKSNETKDETSKR---KHDPAEEE-SAVSTKVSKSEPLEDKGNAEV 62
Query: 339 EEF 331
+EF
Sbjct: 63 KEF 65
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = -2
Query: 507 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 334
D+ + + F E + E A + + ++ +LEE+++ L++++ S + QR+E+
Sbjct: 585 DQQTTEAPFEEPD-EPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQ 641
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 560 PTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPK 453
P+N K PV R+ + R ++NW + S K
Sbjct: 229 PSNVKSPVQQHRSFVSSSARAKKNWGRQSNSPNSNK 264
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -2
Query: 567 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 388
Q+T L++ + L + + + D + + + ++ L AED KS + S+ +E+LK
Sbjct: 307 QMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDEQKS-RSMFSKNDEKLK---- 361
Query: 387 SLKSLEVSEE 358
KSLE+ E+
Sbjct: 362 --KSLELMED 369
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,034,285
Number of Sequences: 5004
Number of extensions: 34194
Number of successful extensions: 239
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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