Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_I14
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical ...    30   1.4  
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical
           protein W06H8.4 protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 267 VCKMKNLEGCCTW*IMYYILFTFTERALPFPALYGFYLKPFYNY 136
           VC  +N E C  +   Y+++F+FT  +L F  LY F  K  Y Y
Sbjct: 219 VC-FRNPELCSVYLSYYHVVFSFTFASLLFMLLY-FLSKAIYEY 260


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
            protein Y48G1C.5 protein.
          Length = 1161

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 120  SATNRNNYKTVLNKSRTKRETAAP 191
            S T   NY++++ ++R+KR+ AAP
Sbjct: 1083 SETGEINYRSLIEQTRSKRKCAAP 1106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,497,732
Number of Sequences: 27780
Number of extensions: 256327
Number of successful extensions: 440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)