Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_I07
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016450-12|AAB65989.1|  278|Caenorhabditis elegans Hypothetical...    78   4e-15
AL032640-2|CAA21643.2|  502|Caenorhabditis elegans Hypothetical ...    32   0.37 
Z81112-2|CAB03274.1|  185|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AC024878-1|AAK85513.1|  173|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical...    29   2.6  
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical...    28   4.6  
AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41026-1|AAM51522.2|  101|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF016450-12|AAB65989.1|  278|Caenorhabditis elegans Hypothetical
           protein B0238.10 protein.
          Length = 278

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 36/65 (55%), Positives = 47/65 (72%)
 Frame = -1

Query: 615 DEKYRKRKXGSRLVRKAIQAMINDTADEVVLXTXITNKPALKLYENLGFVRDKRLFRYYL 436
           DE  R+   G+RLVR+A+ AM +   DE+VL T ++NK A +LY NLGF+R KRL +YYL
Sbjct: 174 DESCRRLGIGTRLVRRALDAMQSKGCDEIVLETEVSNKNAQRLYSNLGFIRQKRLLKYYL 233

Query: 435 NGVDA 421
           NG DA
Sbjct: 234 NGGDA 238


>AL032640-2|CAA21643.2|  502|Caenorhabditis elegans Hypothetical
           protein Y43F8A.2 protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 235 HFNSKSCDTLYVIYYNFFSQILFNDK 158
           HF+S  CDT Y+ YY   S++L+  K
Sbjct: 137 HFDSFDCDTNYIKYYPHISKLLYKPK 162


>Z81112-2|CAB03274.1|  185|Caenorhabditis elegans Hypothetical
           protein T02B5.2 protein.
          Length = 185

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 101 FSICVFKFSIDFNIFVTIDFIIK 169
           F+IC FK SIDF    T D I+K
Sbjct: 2   FTICFFKISIDFQTKTTTDAIVK 24


>AC024878-1|AAK85513.1|  173|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.3 protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 531 VVLXTXITNKPALKLYENLGFVRDKRLFRYYLNGVD 424
           V L   ++NK A++LY+ LG+V  +++  YY    D
Sbjct: 106 VDLFVRVSNKIAIELYKKLGYVVYRQIIGYYTGDRD 141


>Z81455-3|CAB03808.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +3

Query: 312 YFMYILNTAYCKLFKHKIEKSHRLATYFTLATTSTAMHQHH*DNIEIGVYPLQNPSFHIT 491
           Y MY+++     +FK    +SH +    TL  +  A H +    +++G      P+  + 
Sbjct: 292 YVMYLVHWPVIAIFKESTIQSHAVCIALTLLISVVAHHLYEKQYLKLGT----KPTALLI 347

Query: 492 SVLVCL 509
            +L+CL
Sbjct: 348 LLLICL 353


>AL032623-19|CAA21519.2|  890|Caenorhabditis elegans Hypothetical
           protein B0399.2 protein.
          Length = 890

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = +3

Query: 312 YFMYILNTAYCKLFKHKIEKSHRLATYFTLATTSTAMHQHH*DNIEIGVYPLQNPSFHIT 491
           Y MY+++     +FK    +SH +    TL  +  A H +    +++G      P+  + 
Sbjct: 292 YVMYLVHWPVIAIFKESTIQSHAVCIALTLLISVVAHHLYEKQYLKLGT----KPTALLI 347

Query: 492 SVLVCL 509
            +L+CL
Sbjct: 348 LLLICL 353


>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 192 IIFFLKYCLMIKSIVTKILKSIENLKTQIEKFF 94
           +IF  K C+ +   V++  K ++ L  QI KFF
Sbjct: 76  VIFPRKQCMTLSGAVSEAEKRVDQLSIQIAKFF 108


>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 192 IIFFLKYCLMIKSIVTKILKSIENLKTQIEKFF 94
           +IF  K C+ +   V++  K ++ L  QI KFF
Sbjct: 76  VIFPRKQCMTLSGAVSEAEKRVDQLSIQIAKFF 108


>AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical
           protein Y102A5C.33 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -3

Query: 331 LSIYIKYYCLYSYLLCNILPSMWI*PNVVFISHFNSKSCDTLYVIYYNFFSQIL 170
           LS+Y+  Y + + ++C + P ++I   +    H +  S   +Y+  Y F   I+
Sbjct: 185 LSVYLVLYIIVNVIICFLTPFIYIPIIIGMKKHRHLHSQQHIYIHEYMFIQSIM 238


>AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2B.2 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
 Frame = -3

Query: 313 YYCLYSYLLCN-----ILPSMWI*PNVVFISHF---NSKSCDTLYVIYYNFFSQILFNDK 158
           YYC+ S+ + +     +L + ++  +V F +HF   NSK+   + + ++ F +Q+  +  
Sbjct: 60  YYCVVSFFIISTLGATVLSAGFLVLSVYFWTHFRSENSKTKKEIQIRFFWFLTQLTTSTF 119

Query: 157 IYCNKNIEIN-----RKFKN--TN*KIFLVTNFVYDFPLLMLFFSSL 38
           I    N+ IN       F    T  ++F   +++ DF    + FS+L
Sbjct: 120 IISASNLFINIPAALSLFPKEVTQSELFYFVSYLIDFCHYSIIFSNL 166


>Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical
           protein F42G10.1 protein.
          Length = 587

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 142 NIEINRKFKNTN*KIFLVTNFV-YDFPLLMLFFSSLKMNLRFL 17
           N++ + K+KN      L  +F  YDF +L  F+ SLK+++ +L
Sbjct: 114 NLDAHEKYKN------LENSFEGYDFQILTKFYKSLKLSVEYL 150


>U41026-1|AAM51522.2|  101|Caenorhabditis elegans Hypothetical
           protein C28G1.5 protein.
          Length = 101

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = -1

Query: 603 RKRKXGSRLVRKAIQAMINDTADEVVL---XTXITNKPALKLYENLGFVRDKRLFRYYLN 433
           R    G  L  K I AM+N++  E       T I N    KL +N   +      RY LN
Sbjct: 23  RNLTCGHALCHKCITAMVNNSTVECPFCRTVTNIVNNDITKLLKNFALIEVIEDARYSLN 82

Query: 432 GVD 424
             D
Sbjct: 83  KKD 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,632,667
Number of Sequences: 27780
Number of extensions: 226062
Number of successful extensions: 590
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)