Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_I04
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 136 1e-32
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 3e-21
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 68 6e-12
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 57 1e-08
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 31 0.66
01_03_0105 + 12604125-12604583 31 0.66
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.6
07_03_1139 + 24254662-24255306 29 3.5
02_02_0154 + 7263707-7263782,7263908-7264248 29 3.5
03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 29 4.6
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 4.6
12_01_1057 - 10899871-10899961,10900255-10900411,10901420-109014... 28 6.1
07_01_0478 - 3605306-3605614,3605766-3605906 28 6.1
05_06_0209 - 26389902-26389928,26389981-26390161,26390265-263904... 28 6.1
02_03_0183 + 16106205-16106474 28 6.1
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 136 bits (330), Expect = 1e-32
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = -1
Query: 601 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 422
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 421 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 260
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1
Query: 694 VCPTEIIAXSEKADEFRKIGCEVXGASTXS 605
VCPTEI A S++ DEF K+ E+ G S S
Sbjct: 113 VCPTEITAFSDRYDEFEKLNTEILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect(2) = 3e-21
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -1
Query: 496 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 320
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 319 NWRPGAKTIKPDTKAAQEYF 260
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 28.3 bits (60), Expect(2) = 3e-21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 694 VCPTEIIAXSEKADEFRKIGCEVXGASTXS 605
V EI A S++ +EF KI EV G S S
Sbjct: 49 VSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Frame = -1
Query: 694 VCPTEIIAXSEKADEFRKIGCEVXGASTXSHFTHLAWINTPRKQGGLGPMNIPLISDKSH 515
VC TE+ A + A EF K G ++ G S +H WI + P+++D S
Sbjct: 80 VCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSR 139
Query: 514 RISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQ 353
+ ++D + G +P R L I+ + ++ + VGR+++E +R V A Q
Sbjct: 140 EAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKLSFLYPACVGRNMDEVVRAVDALQ 199
Query: 352 FTDKHGEVCPANWRPGAKTIKP 287
KH P NW+PG + + P
Sbjct: 200 TAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = -1
Query: 694 VCPTEIIAXSEKADEFRKIGCEVXGASTXSHFTHLAWINTPRKQGGLGPMNIPLISDKSH 515
VC TE+ + A EF K G ++ G S +H WI + P+++D
Sbjct: 45 VCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDWIKDIEAYKPGRRVGFPIVADPDR 104
Query: 514 RISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQ 353
R ++D ++T +P R L I+ + ++ + GR++ E LR A
Sbjct: 105 EAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKLSFLFPACTGRNMAEVLRATDALL 164
Query: 352 FTDKHGEVCPANWRPGAKTIKPDTKAAQE 266
+H P NW+PG + + P + +E
Sbjct: 165 TAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 377 GLLHRPPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQHSVVAGDAVRLVAYQRNVHGAE 556
G+L +G+VVD L + ++DD E +L +H A +R + R+V G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGGDT 899
Query: 557 SALLARR 577
+ ++RR
Sbjct: 900 AGAVSRR 906
>01_03_0105 + 12604125-12604583
Length = 152
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 548 HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPA 402
H+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 63 HQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 571 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 413
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>07_03_1139 + 24254662-24255306
Length = 214
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = -3
Query: 584 DQHAAQAGRTRPHEHSSDKRQVAPHLPRLR---------SAGRGDGHSLPRTLHHRRQAE 432
D A +T P H D PHLP L +AG P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 431 PQADHDQRPA 402
A +RPA
Sbjct: 200 ADAFLARRPA 209
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 468 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIXARCVKCXSVEAPXTS 632
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>03_05_0554 -
25551220-25551310,25551562-25551695,25552115-25552221,
25552359-25552437,25552524-25552613,25552790-25553044,
25553388-25553537,25553677-25553976
Length = 401
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 261 KYSWAALVSGLMVLAPGLQ 317
KY W A+ G MVL PGL+
Sbjct: 370 KYRWKAIKGGTMVLGPGLR 388
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 341 LVRELEGLHQPQGLLHRPPHGQVVDRDLPEVLL 439
+VRE E LHQ G P DLPE LL
Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149
>12_01_1057 -
10899871-10899961,10900255-10900411,10901420-10901498,
10901618-10901707,10903232-10903486,10903674-10903689,
10903907-10903940,10905653-10905884
Length = 317
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 261 KYSWAALVSGLMVLAPGLQ 317
KY W + G MVL PGLQ
Sbjct: 286 KYRWKVIKGGKMVLCPGLQ 304
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 488 GRGDGHSLPRTLHHR 444
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>05_06_0209 -
26389902-26389928,26389981-26390161,26390265-26390407,
26390480-26390588,26390839-26391023,26391428-26392082,
26392392-26392496,26392757-26392844,26392885-26392947,
26393451-26393513,26394328-26394484
Length = 591
Score = 28.3 bits (60), Expect = 6.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 223 DCWCGVVSSWRR 258
DCWCG + WRR
Sbjct: 8 DCWCGALRLWRR 19
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 538 PLISDKSHRISRDYGVLDEETGIP 467
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,938,365
Number of Sequences: 37544
Number of extensions: 302722
Number of successful extensions: 1101
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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