Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_I03
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1362 + 26406710-26408530                                         29   4.3  
01_06_0100 - 26424769-26425545,26425666-26425697,26425778-264258...    28   7.5  

>08_02_1362 + 26406710-26408530
          Length = 606

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -3

Query: 603 GRKMKKVLSHQVKNLMKRNLPXTTMKKKKVLNPNQLKNHTKKXIVRKPTMKSLL 442
           GR M+++L+H ++NL +++        K +   N +    +K +V  P ++ LL
Sbjct: 409 GRCMREILTHLLRNLDEKSRLYDDAGLKNIFLMNNIYYIVQKMMVEFPALRELL 462


>01_06_0100 -
           26424769-26425545,26425666-26425697,26425778-26425894,
           26426067-26426118,26426229-26426281,26426883-26427585
          Length = 577

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -3

Query: 609 IMGRKMKKVLSHQVKNLMKRNLPXTTMKKKKVLNPNQLKNHTKKXIVRKPTMK 451
           ++   MKK ++ +    M+R +  T MK++ +     +K  T+K  +++ TMK
Sbjct: 371 VVAGMMKKKMTMKRMMTMRRKMKRTMMKRR-MRKRTTMKRRTRKRTMKRRTMK 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,899,566
Number of Sequences: 37544
Number of extensions: 139004
Number of successful extensions: 330
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)