Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H24
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 260 8e-70
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 260 1e-69
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 259 2e-69
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 145 3e-35
07_03_1357 - 25982861-25983068,25983354-25983361 60 1e-09
07_03_1358 - 25984897-25984997,25985623-25985650 47 2e-05
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.31
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 29 2.9
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 3.9
02_05_1008 - 33461225-33462334 29 3.9
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 5.1
07_01_1186 + 11266210-11266517,11266608-11266656 29 5.1
03_06_0069 - 31449319-31450368 28 6.8
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 28 6.8
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 6.8
11_06_0292 - 22015603-22015716,22015774-22016163 28 9.0
08_02_0287 + 15347145-15349604 28 9.0
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 260 bits (637), Expect = 8e-70
Identities = 121/184 (65%), Positives = 149/184 (80%)
Frame = -2
Query: 553 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 374
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 373 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 194
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 193 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVQEEEPPSRXQGGGAA 14
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV+ + GGG
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDG 189
Query: 13 NDEE 2
+E+
Sbjct: 190 EEED 193
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 260 bits (636), Expect = 1e-69
Identities = 121/184 (65%), Positives = 148/184 (80%)
Frame = -2
Query: 553 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 374
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 373 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 194
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 193 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVQEEEPPSRXQGGGAA 14
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV+ + GGG
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDV 405
Query: 13 NDEE 2
N +
Sbjct: 406 NSND 409
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 259 bits (634), Expect = 2e-69
Identities = 121/182 (66%), Positives = 148/182 (81%)
Frame = -2
Query: 547 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 368
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 367 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 188
+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 187 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVQEEEPPSRXQGGGAAND 8
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV+ + GGG +
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEE 214
Query: 7 EE 2
E+
Sbjct: 215 ED 216
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 145 bits (352), Expect = 3e-35
Identities = 74/127 (58%), Positives = 91/127 (71%)
Frame = -2
Query: 553 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 374
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 373 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 194
+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 193 LIRQRHI 173
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -2
Query: 172 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVQEEEPPSRXQGGGAANDEE 2
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RV+ + + GG +EE
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGGGDGEEEEE 59
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -2
Query: 553 FSKTYVTPRRPFEKARLDQELKIIGEYG 470
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = -2
Query: 391 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 224
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 223 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 131
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 115 KHIDFSLKSPFGGGRP--GRVQEEEPPSRXQGGGAAND 8
KHI +L GGG+P G + EE GGG A D
Sbjct: 113 KHIKATLAKRLGGGKPKEGTIPEEGGVGAGGGGGGAAD 150
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 257 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 129
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = -2
Query: 313 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 134
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 133 VRLDSGKHIDFSLKSPFGGGR 71
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 274 IEDFLERRLQTQVFKAGLAKSIHHAR 197
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 82 GGGRPGRVQEEEPPSRXQGGGA 17
GGGRPGR ++ + R Q GG+
Sbjct: 51 GGGRPGRGRQAQAQCRAQAGGS 72
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 202 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 333
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 487 SSTLGQDVPFQKDDEVSRTSLKIPTVLCCSPSWRARTHCSPIRIXKAS 630
S+ +D F++DD S + +PT LC S S A + S + K++
Sbjct: 190 STEFKKDQSFRRDDNHSSQTRNMPTELCTSSSEEAHIYESSLHGTKSN 237
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 499 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 377
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>11_06_0292 - 22015603-22015716,22015774-22016163
Length = 167
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -2
Query: 136 IVRLDSGKHIDFSLKSPFGGGRPGRVQEEEPPSRXQGGGAANDEE 2
I L G+ + L SP G G EEE P GGGAA E
Sbjct: 36 ISTLAQGRLVAGDLPSPSSDGGGGGGGEEEEPRIGGGGGAAGAGE 80
>08_02_0287 + 15347145-15349604
Length = 819
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 704 CSSVNDGQYVFNTTHYRE 651
CS VND + VFN HY++
Sbjct: 471 CSLVNDAKTVFNMLHYKD 488
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,743,448
Number of Sequences: 37544
Number of extensions: 458506
Number of successful extensions: 1359
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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