Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H21
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 47 2e-06
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 45 1e-05
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 35 0.009
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 28 1.0
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 27 1.8
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 26 5.3
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 7.1
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 25 9.3
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = -1
Query: 420 PIMFYSGQLDIIVAYPLTEKFLANLNFSAVVEYKFAPRNIWRVDGDVAGYVRKAGNLTEV 241
P++ Y+G D I Y E + L ++ E+ A W +G AG + N +
Sbjct: 912 PVLIYAGDADYICNYMGNEAWTDALEWAGQREFYEAELKPWSPNGKEAGRGKSFKNFGYL 971
Query: 240 LVRNAGHMVPRDQPKWAFELITQFIN 163
+ AGHMVP +QP+ + E++ +I+
Sbjct: 972 RLYEAGHMVPFNQPEASLEMLNSWID 997
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 44.8 bits (101), Expect = 1e-05
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = -1
Query: 459 SVAPLLAKLLSHYPIMFYSGQLDIIVAYPLTEKFLANLNFSAVVEYKFAPRNIWRVDG-- 286
S + L+ L+S PI+ + G+ D + Y EK +L ++ V ++ + + G
Sbjct: 345 SSSKLIQDLVSTVPILLFYGENDFLCNYLSGEKLTRSLEWNGAVGFQNQSAQPFYLPGYS 404
Query: 285 -DVAGYVRKAGNLTEVLVRNAGHMVPRDQPKWAFELITQFIN 163
+G + NLT + A HMVP D P LIT F N
Sbjct: 405 DQPSGSYVSSRNLTFARIVEASHMVPYDHPNEMKTLITAFFN 446
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.1 bits (77), Expect = 0.009
Identities = 27/121 (22%), Positives = 52/121 (42%)
Frame = -1
Query: 546 TVRRGVHVGGLAFNDGLQVLTSLVDDLTRSVAPLLAKLLSHYPIMFYSGQLDIIVAYPLT 367
T GV G F+ +++++ V+ + + P +L Y + F +G LD+ + + T
Sbjct: 386 TSGEGVFADGCNFDLYKKIVSNNVESVLVEIIP---RLTEKYKVSFLAGALDLQILWTGT 442
Query: 366 EKFLANLNFSAVVEYKFAPRNIWRVDGDVAGYVRKAGNLTEVLVRNAGHMVPRDQPKWAF 187
L N ++ + +P ++ +G + NL L + GHM P P+
Sbjct: 443 LLALQNTTWNGWQGFTQSPGSLETTNG----FTLDERNLAFTLSNSVGHMAPSKDPQMVR 498
Query: 186 E 184
E
Sbjct: 499 E 499
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 570 YADLLKDDTVRRGVHVGGLAFNDGLQVLTSLVDDLTRSVAPLLAKLLSHYPIMFYSGQ 397
Y L T R V+ G + F++ +V +DD R + PL+A L +P + GQ
Sbjct: 128 YTSNLVHSTERCEVYAGLICFHELAKVYRWRLDDRQRDIGPLVAAL---FPTILQLGQ 182
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 27.5 bits (58), Expect = 1.8
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +2
Query: 95 NFCVCSNIELQAK*SC*NFYKILLINCVISSKAHLGWSRGTMWPAFRTNTSVRLPAFLT* 274
N+C LQ+K + I+LI+C IS G W L A L
Sbjct: 59 NWCTSLTKMLQSKDFRIRWSAIILIHCTISQSWDCLVEHGATWAKL-------LIALLNR 111
Query: 275 PATSPSTLQ--MFLGANLYSTTAEKFKLARNFSVRGYATMMSSC 400
P T P TL+ M + ++S+T + + R T +++C
Sbjct: 112 PET-PKTLEIAMITVSKMFSSTVGRPAVTRELVTPNLPTFVNNC 154
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 504 DGLQVLTSLVDDLTRSVAPLLAKLLSHY 421
DG+ ++ D TR+ P+L K + HY
Sbjct: 148 DGISENPYIISDETRAAGPILYKGIGHY 175
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 7.1
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 483 SLVDDLTRSVAPLLAKLLSHYPIMFYSGQLDII--VAYPLTEKFLANLNFSAVVEYKFAP 310
S DDL S P L +LLS++ + +D++ +A+ + FL S++ + A
Sbjct: 113 SFADDLFESSKPCLNQLLSYFSDITAFRSMDVVADIAFVCSPNFLTLKWNSSLFDDDLAR 172
Query: 309 RNIWRVDGDVAGY 271
+ ++ + Y
Sbjct: 173 LLFFMINSKITNY 185
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 341 KFKLARNFSVRGYATMMSSCPL 406
K + RNFSV Y T+++ C L
Sbjct: 606 KLQKTRNFSVDDYDTLITKCTL 627
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,407,895
Number of Sequences: 5004
Number of extensions: 45907
Number of successful extensions: 114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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