Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_H19
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82080-3|CAD92380.1|  200|Caenorhabditis elegans Hypothetical pr...    35   0.072
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z82080-3|CAD92380.1|  200|Caenorhabditis elegans Hypothetical
           protein W09G3.3 protein.
          Length = 200

 Score = 34.7 bits (76), Expect = 0.072
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
 Frame = -1

Query: 476 KKRNSYIKYAVGMICTHKKHKYTGIIRGWDLIWAADWK----EHGEALNRLEFGHNQPFY 309
           + R  ++++ VG + TH K  + G+I GWD    A  K     HGE  N       QP Y
Sbjct: 84  RHRAPHVEFRVGDVITHTKLNFRGVIIGWDEHAIAPEKFLKVAHGENKNYA----TQPNY 139

Query: 308 YLIIANQSS-----RYVAQENL 258
            ++I  +        Y+ QENL
Sbjct: 140 AVLIDTRDRLTPQLSYIVQENL 161


>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical protein
            C05C10.2b protein.
          Length = 1553

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -1

Query: 758  ILXSYLNSMGVHDNWTTQNSLRLVDLLNPSQNLDNVNQSHLSYLRNEVDLANYPELS 588
            I+  +L+ +   + W+T     +V+ +  + NL N N  + +  RN+V L++YP +S
Sbjct: 1439 IIIGHLDGLRRANYWST-----IVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLIS 1490


>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical protein
            C05C10.2a protein.
          Length = 1551

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -1

Query: 758  ILXSYLNSMGVHDNWTTQNSLRLVDLLNPSQNLDNVNQSHLSYLRNEVDLANYPELS 588
            I+  +L+ +   + W+T     +V+ +  + NL N N  + +  RN+V L++YP +S
Sbjct: 1439 IIIGHLDGLRRANYWST-----IVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLIS 1490


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 359 HGEALNRLEFGHNQPFYYLIIANQSSRYVAQENLSALTVPPRMPHLEDLIA 207
           H E+ N + FG   P   + ++  S+  +  E L  LT+ P    L+DL A
Sbjct: 277 HDESRNEIPFGRRTPEQAICVSMSSTPQMYAEKLEKLTLSP--IGLDDLFA 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,750,888
Number of Sequences: 27780
Number of extensions: 345159
Number of successful extensions: 962
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)