Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_H14
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0026 + 201042-201110,201252-201359,202511-202639,203164-20...    30   2.3  
11_05_0033 + 18500092-18501372,18502419-18502826,18502948-185029...    29   3.0  
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291...    29   3.9  

>01_01_0026 +
           201042-201110,201252-201359,202511-202639,203164-203440,
           203543-203647,203730-203875,204042-204149,204290-204378,
           204552-205098
          Length = 525

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 557 GTTYILTFPS*AIICNSIGSFEKQNTNEPSINSISFKSY 673
           G+  IL  P  +  CNS G+ E QN  E S++ I  K Y
Sbjct: 282 GSEEILPLPVVSRPCNSTGTKEVQNLIETSLSKIVLKDY 320


>11_05_0033 + 18500092-18501372,18502419-18502826,18502948-18502990,
            18503236-18503282,18504582-18505901
          Length = 1032

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 455  YFYSLKNVLSLNTQSFYNLHVISLRKMWSYVARNGTTYILTFP 583
            +F+++KNV +L   +  N H++  R MW YV +     +LT P
Sbjct: 949  WFFAVKNV-ALLMMTLPN-HILFNRFMWDYVRQTDAKLLLTLP 989


>07_01_0389 -
           2915191-2915604,2915696-2915752,2915867-2915922,
           2916053-2916113,2916243-2916365,2916505-2916537,
           2916617-2916709,2916839-2916934,2917025-2917203,
           2917344-2917530,2918051-2918184,2918311-2918518,
           2918598-2918633,2918785-2919241,2919633-2919736,
           2920489-2920569,2920646-2920697,2920837-2920876,
           2920991-2921085,2921241-2921383,2921899-2922006,
           2922120-2922221,2922302-2922348,2922425-2922554,
           2923173-2923304,2923404-2923616,2923709-2923963,
           2924053-2924799
          Length = 1460

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = -1

Query: 590 LKMERLRYMLFHCVLHTTTFFLGKLRADYRRTAYLSLKRF*GNKNKEQEMENSNSD 423
           L +  LRY+  H    T+ F L K   D      +S KR  G+K+K    E SNSD
Sbjct: 765 LSLPDLRYVGDHGSTSTSKFNLPKNMGDQNMEGNVSNKRQKGHKDKASS-EKSNSD 819


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,344,031
Number of Sequences: 37544
Number of extensions: 242604
Number of successful extensions: 371
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)