Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H14
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 27 0.19
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 26 0.43
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 26 0.43
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 26 0.43
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 4.0
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 4.0
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 7.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 7.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 7.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 7.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 7.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.3
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.3
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 27.1 bits (57), Expect = 0.19
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 90 NRNISRKSNVKEKKSRIHYNKICRQLFQNTLY 185
NR I +N K + +YN C++L+ N Y
Sbjct: 87 NRTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 90 NRNISRKSNVKEKKSRIHYNKICRQLFQNTLY 185
N+ I +N K + +YN C++L+ N Y
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 90 NRNISRKSNVKEKKSRIHYNKICRQLFQNTLY 185
N+ I +N K + +YN C++L+ N Y
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 90 NRNISRKSNVKEKKSRIHYNKICRQLFQNTLY 185
N+ I +N K + +YN C++L+ N Y
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKLYYNINY 118
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 210 MYLFAKQYTFKILSFF*HNLI*NKLCFSYKKI 305
M+L ++Q T K+ + +N I + L SYKK+
Sbjct: 80 MFLISQQKTSKLKIYKWNNQILHILWTSYKKV 111
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 210 MYLFAKQYTFKILSFF*HNLI*NKLCFSYKKI 305
M+L ++Q T K+ + +N I + L SYKK+
Sbjct: 63 MFLISQQKTSKLKIYKWNNQILHILWTSYKKV 94
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 98 YIKEKQCQRKKK*NTLQQNM*TIISKYI 181
YI+E+ Q++++ T QQ I+ KY+
Sbjct: 230 YIQEQNQQQQQQPLTQQQYQQQIVGKYL 257
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 17 QSYFNVSKVENXFLR 61
QSYF+++ N F+R
Sbjct: 105 QSYFHIATTSNEFIR 119
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 17 QSYFNVSKVENXFLR 61
QSYF+++ N F+R
Sbjct: 105 QSYFHIATTSNEFIR 119
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +3
Query: 96 NISRKSNVKEKKSRIHYNKICRQLFQNTLY 185
++S K+ + +YN C++L+ N Y
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNCKKLYYNINY 113
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 17 QSYFNVSKVENXFLR 61
QSYF+++ N F+R
Sbjct: 44 QSYFHIATTSNEFIR 58
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 81 NSYNRNISRKSNVKEKKSRIHYN 149
N+Y NIS +N +++YN
Sbjct: 87 NNYISNISNYNNNNNYNKKLYYN 109
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 81 NSYNRNISRKSNVKEKKSRIHYN 149
N+Y NIS +N +++YN
Sbjct: 87 NNYISNISNYNNDNNYNKKLYYN 109
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 81 NSYNRNISRKSNVKEKKSRIHYN 149
N+Y NIS +N +++YN
Sbjct: 325 NNYISNISNYNNNNNYNKKLYYN 347
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,471
Number of Sequences: 438
Number of extensions: 4230
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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