Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_H13
         (744 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.       128   2e-29
AL391827-1|CAI16230.1|   94|Homo sapiens novel protein protein.        53   9e-07

>AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.
          Length = 689

 Score =  128 bits (309), Expect = 2e-29
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 10/225 (4%)
 Frame = -2

Query: 743 ILDDELALNGYGQVITTALNDYVMSAFXXXXXXXXXXGWLSSLTSMVGGIFLTNDEQQPL 564
           I+DDE  LNG G VI  AL++Y  +            G+ S+LT+MVG +F+ +  ++  
Sbjct: 234 IVDDEATLNGMGLVIAQALSEY--NRQYKDKEEEHQSGFFSALTNMVGSMFIADAHEKIS 291

Query: 563 ARGQRNNGAEEGMLLAMYEASHLNRNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPN-- 390
            +        E +LLA+YEA HLNRNF+                                
Sbjct: 292 VQ------TNEAILLALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345

Query: 389 -----LAQIQA-LDND-QPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQ 231
                ++ ++  LD D Q +NLL+TF +Y SI+M DT+ E  ++   LC I LTCI EDQ
Sbjct: 346 PSSDVISSVELPLDADVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEDQ 405

Query: 230 FANSIMHDQNLTFKVQLYRLPMRHRKIVLEEP-PSQPLASTLIGL 99
           +AN+ +HD N+ F+V L+R+PMRHRK   ++  P +PL   ++ L
Sbjct: 406 YANAFLHDDNMNFRVNLHRMPMRHRKKAADKNLPCRPLVCAVLDL 450


>AL391827-1|CAI16230.1|   94|Homo sapiens novel protein protein.
          Length = 94

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = -2

Query: 371 LDND-QPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHDQNL 198
           LD D Q +NLL+TF +Y SI+M DT+ E  ++   LC I LTCI E         D+NL
Sbjct: 6   LDADVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEPMRHRKKAADKNL 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,019,313
Number of Sequences: 237096
Number of extensions: 1866375
Number of successful extensions: 2910
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2909
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)