Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H13
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069483-1|AAL39628.1| 706|Drosophila melanogaster LD21733p pro... 166 3e-41
AE014297-831|AAF54299.2| 706|Drosophila melanogaster CG8379-PA,... 166 3e-41
AE014297-830|AAS65128.1| 707|Drosophila melanogaster CG8379-PB,... 166 3e-41
AB190179-1|BAD44692.1| 841|Drosophila melanogaster transcriptio... 31 1.3
AY047507-1|AAK77239.1| 390|Drosophila melanogaster GH01592p pro... 29 6.7
AE013599-2490|AAS64820.1| 390|Drosophila melanogaster CG4847-PE... 29 6.7
AE013599-2489|AAM70882.1| 390|Drosophila melanogaster CG4847-PC... 29 6.7
AE013599-2488|AAM70881.1| 390|Drosophila melanogaster CG4847-PB... 29 6.7
AE013599-2487|AAF57850.1| 390|Drosophila melanogaster CG4847-PA... 29 6.7
AE013599-2486|AAM70880.1| 420|Drosophila melanogaster CG4847-PD... 29 6.7
>AY069483-1|AAL39628.1| 706|Drosophila melanogaster LD21733p
protein.
Length = 706
Score = 166 bits (403), Expect = 3e-41
Identities = 94/216 (43%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Frame = -2
Query: 743 ILDDELALNGYGQVITTALNDYVMSAFXXXXXXXXXXGWLSSLTSMVGGIFLTNDEQQPL 564
IL DELALNGYGQ+I+ +L D+ + W SSL+++VG +F++++ + +
Sbjct: 228 ILADELALNGYGQMISQSLIDFCRQ-YIQSLNNVQSSSWFSSLSNIVGNMFVSDEGCERV 286
Query: 563 ARGQRNNGAEEGMLLAMYEASHLNRNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLA 384
+ + NNG +LLA+YEA HLNRNF+ + A
Sbjct: 287 QQIKANNG----LLLALYEAVHLNRNFITTLAHTQAESSAPPSPSNTLSLAQPVPDLSNA 342
Query: 383 QIQALDNDQPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHDQ 204
I + PTNLLV FQYCSI+M D ++ESSI LCF+ LTCI EDQ+ANS+MHD
Sbjct: 343 PIIDI-TQYPTNLLVAVFQYCSIVMQDNKNESSIANLKLCFLILTCISEDQYANSMMHDS 401
Query: 203 NLTFKVQLYRLPMRHRKIVLEE-PPSQPLASTLIGL 99
NLTFKV L+R MRHRK+ ++ SQPLA+TL+ L
Sbjct: 402 NLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDL 437
>AE014297-831|AAF54299.2| 706|Drosophila melanogaster CG8379-PA,
isoform A protein.
Length = 706
Score = 166 bits (403), Expect = 3e-41
Identities = 94/216 (43%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Frame = -2
Query: 743 ILDDELALNGYGQVITTALNDYVMSAFXXXXXXXXXXGWLSSLTSMVGGIFLTNDEQQPL 564
IL DELALNGYGQ+I+ +L D+ + W SSL+++VG +F++++ + +
Sbjct: 228 ILADELALNGYGQMISQSLIDFCRQ-YIQSLNNVQSSSWFSSLSNIVGNMFVSDEGCERV 286
Query: 563 ARGQRNNGAEEGMLLAMYEASHLNRNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLA 384
+ + NNG +LLA+YEA HLNRNF+ + A
Sbjct: 287 QQIKANNG----LLLALYEAVHLNRNFITTLAHTQAESSAPPSPSNTLSLAQPVPDLSNA 342
Query: 383 QIQALDNDQPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHDQ 204
I + PTNLLV FQYCSI+M D ++ESSI LCF+ LTCI EDQ+ANS+MHD
Sbjct: 343 PIIDI-TQYPTNLLVAVFQYCSIVMQDNKNESSIANLKLCFLILTCISEDQYANSMMHDS 401
Query: 203 NLTFKVQLYRLPMRHRKIVLEE-PPSQPLASTLIGL 99
NLTFKV L+R MRHRK+ ++ SQPLA+TL+ L
Sbjct: 402 NLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDL 437
>AE014297-830|AAS65128.1| 707|Drosophila melanogaster CG8379-PB,
isoform B protein.
Length = 707
Score = 166 bits (403), Expect = 3e-41
Identities = 94/216 (43%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Frame = -2
Query: 743 ILDDELALNGYGQVITTALNDYVMSAFXXXXXXXXXXGWLSSLTSMVGGIFLTNDEQQPL 564
IL DELALNGYGQ+I+ +L D+ + W SSL+++VG +F++++ + +
Sbjct: 229 ILADELALNGYGQMISQSLIDFCRQ-YIQSLNNVQSSSWFSSLSNIVGNMFVSDEGCERV 287
Query: 563 ARGQRNNGAEEGMLLAMYEASHLNRNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLA 384
+ + NNG +LLA+YEA HLNRNF+ + A
Sbjct: 288 QQIKANNG----LLLALYEAVHLNRNFITTLAHTQAESSAPPSPSNTLSLAQPVPDLSNA 343
Query: 383 QIQALDNDQPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHDQ 204
I + PTNLLV FQYCSI+M D ++ESSI LCF+ LTCI EDQ+ANS+MHD
Sbjct: 344 PIIDI-TQYPTNLLVAVFQYCSIVMQDNKNESSIANLKLCFLILTCISEDQYANSMMHDS 402
Query: 203 NLTFKVQLYRLPMRHRKIVLEE-PPSQPLASTLIGL 99
NLTFKV L+R MRHRK+ ++ SQPLA+TL+ L
Sbjct: 403 NLTFKVMLHRAQMRHRKLNVDRVGKSQPLAATLLDL 438
>AB190179-1|BAD44692.1| 841|Drosophila melanogaster transcription
factor dRFX2 protein.
Length = 841
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 383 QIQALDND-QPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHD 207
Q Q +ND P+ L T Q II D++ + I+ + CF + QF N I D
Sbjct: 465 QDQQENNDLDPSLHLETKCQQADIINKDSKFNTIIDMSNNCFDNFISTKQFQFENDIFTD 524
Query: 206 QNLTF 192
N+ F
Sbjct: 525 DNIQF 529
>AY047507-1|AAK77239.1| 390|Drosophila melanogaster GH01592p
protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 224 NLVDCGPVEDFGLNGCDGGFQEAAF 248
>AE013599-2490|AAS64820.1| 390|Drosophila melanogaster CG4847-PE,
isoform E protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 224 NLVDCGPVEDFGLNGCDGGFQEAAF 248
>AE013599-2489|AAM70882.1| 390|Drosophila melanogaster CG4847-PC,
isoform C protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 224 NLVDCGPVEDFGLNGCDGGFQEAAF 248
>AE013599-2488|AAM70881.1| 390|Drosophila melanogaster CG4847-PB,
isoform B protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 224 NLVDCGPVEDFGLNGCDGGFQEAAF 248
>AE013599-2487|AAF57850.1| 390|Drosophila melanogaster CG4847-PA,
isoform A protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 224 NLVDCGPVEDFGLNGCDGGFQEAAF 248
>AE013599-2486|AAM70880.1| 420|Drosophila melanogaster CG4847-PD,
isoform D protein.
Length = 420
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 85 NLVECKPIK-VDANGCDGGSSRTIF 156
NLV+C P++ NGCDGG F
Sbjct: 254 NLVDCGPVEDFGLNGCDGGFQEAAF 278
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,542,647
Number of Sequences: 53049
Number of extensions: 607156
Number of successful extensions: 1232
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -