Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H06
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 251 7e-68
SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr... 161 1e-40
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 30 0.30
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 0.92
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 2.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.9
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 26 6.5
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 6.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 6.5
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 26 6.5
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 6.5
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 25 8.6
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.6
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 8.6
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 251 bits (615), Expect = 7e-68
Identities = 117/204 (57%), Positives = 148/204 (72%), Gaps = 2/204 (0%)
Frame = -2
Query: 740 QPIXAFHRDEWL--PESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTS 567
QPI A+H EW P LP+KYAG STC+R+E GSHGRD GIFRVH FEK+EQFVLT
Sbjct: 241 QPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFVLTD 300
Query: 566 PHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRE 387
P SW+ EMIN+AE+F K+L LPYR+V IVSGALN+AA+KK DLEAWFP G ++E
Sbjct: 301 PEK--SWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGEYKE 358
Query: 386 LVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGIK 207
LVSCSNC +YQ+R L +R G K + +YVH LN+T+CAT R +C ILE +QT DG+
Sbjct: 359 LVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPDGVN 418
Query: 206 VPEILKPWLPKQYQELIPFVKPAP 135
VP++L+P++ + +PF K P
Sbjct: 419 VPKVLQPYMGG--KTFLPFTKELP 440
>SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 454
Score = 161 bits (390), Expect = 1e-40
Identities = 79/173 (45%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
Frame = -2
Query: 683 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEEFC 504
K G+S +R+E G+ G++ RG++R+H+F KVE F T H + S +M +E++N +EF
Sbjct: 283 KVVGVSRAYRREAGARGKENRGLYRLHEFTKVELFAWT--HPSRSSEMFNEIVNFQKEFV 340
Query: 503 KALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQ 324
+ L +P R++N+ + L +AS+K D+EAW P ++ E+ S SNCLEYQARRLL RY
Sbjct: 341 ETLKIPARILNMPTAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRLLTRYRN 400
Query: 323 TKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG-IKVPEILKPWLPKQY 168
K + +VH LN T A R+I AILE HQ EDG +KVPE L P++ K+Y
Sbjct: 401 DKD----SGFVHTLNGTAAAIPRLIIAILENHQQEDGTVKVPETLVPYIHKEY 449
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -2
Query: 392 RELVSCSNCLEYQ-----ARRLLVRYGQTKKMN 309
REL SC NC+ YQ ++RL Y TKK N
Sbjct: 23 RELPSCQNCIVYQEECHYSKRLKRSYSATKKKN 55
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 28.7 bits (61), Expect = 0.92
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 212 IKVPEILKPWLPKQYQELIP 153
+ + +L+PWLP + QE++P
Sbjct: 289 VAIVRVLRPWLPSKLQEVLP 308
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 440 SKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 330
SKKL+ E W P +F E++ ++ LE +++ L V +
Sbjct: 1394 SKKLEEEYWLPFLLSFNEIICEASDLEVRSKALKVLF 1430
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 4.9
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +1
Query: 382 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNS-SALFIISSIICQDAL 558
+SSL++ DP ++ SS + P T+ SA S S+ ++ SS + +
Sbjct: 161 SSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSS 220
Query: 559 S*GDVRTNCSTFSN*CTRKIPRVSRP*DPTS 651
S ++ T S+ T IP S TS
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 446 AASKKLDLEAWFPGSGAFRELV 381
+A+KK ++ W PGSG ++V
Sbjct: 156 SAAKKYGIQFWGPGSGIIHQIV 177
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 700 NHLFPSNMRDSPHASDKRLDLMDVTRVVSFEYI 602
N L N+ +SP S+KR+ ++D + ++ E++
Sbjct: 30 NELKNQNLFESPAESEKRVKVLDELQQITTEFV 62
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 6.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 382 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNSSALFIISSIICQDALS 561
T + P P + S S + + FTT GSP N+S+ F+ SS+I +LS
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSP--YYNTSS-FLPSSVISSASLS 240
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 165 LILLRKPRFQDFRYLDAV--LCLVYFEYG 245
LI++R+P++Q F Y AV L + FE+G
Sbjct: 207 LIVIREPKYQKFAYGKAVGKLKNIVFEHG 235
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 646 TSC-LKHVESPAYLMGRDDSGSHSSLW 723
TSC H SP +MGR G S +W
Sbjct: 166 TSCGSPHYASPEIIMGRSYDGCASDIW 192
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 539 SFAKMRYHEEMLEQIVPPFQIDVLERYHACHVHEIQPL 652
+ A R HE+ L + P +D R HA H+++ L
Sbjct: 19 TLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQL 56
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 181 SQGFRISGTLMPSSVWCTSSMAQMTLVVAHMVAFSMCTYSVAAFIF 318
++GFRI GTL+ S V +S + V AFS+ + +FI+
Sbjct: 64 NEGFRIEGTLLESLVESVTSASNYPKV----NAFSLMCSGIPSFIW 105
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 288 HAERDHVRHHQGHLRHTRSTPDRGRHQ 208
H E H RH + +R DR RH+
Sbjct: 35 HRESKHGRHDRSERPSSREAGDRSRHE 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,065,841
Number of Sequences: 5004
Number of extensions: 63275
Number of successful extensions: 205
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -