Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H06
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical pr... 339 1e-93
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 121 5e-28
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 121 5e-28
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 32 0.49
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.49
AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine re... 31 0.65
U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I pro... 31 1.1
AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase pro... 31 1.1
AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase pro... 31 1.1
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 29 4.6
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z68882-1|CAA93105.1| 487|Caenorhabditis elegans Hypothetical
protein C47E12.1 protein.
Length = 487
Score = 339 bits (834), Expect = 1e-93
Identities = 150/204 (73%), Positives = 177/204 (86%)
Frame = -2
Query: 740 QPIXAFHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPH 561
QPI A+HR+EW+ E+ LPIKYAG+STCFRQEVGSHGRDTRGIFRVHQFEK+EQFVL SP+
Sbjct: 274 QPIAAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPN 333
Query: 560 DNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELV 381
DN SW + DEMI NAE + + L +PY+VVNIVSG LN+AA+KK DLEAWFPGSGA+RELV
Sbjct: 334 DNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELV 393
Query: 380 SCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDGIKVP 201
SCSNCL+YQ+RRL VRYGQTKK++ +VHMLNATMCATTRVICAILE +QTE+GI VP
Sbjct: 394 SCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATTRVICAILENNQTEEGINVP 453
Query: 200 EILKPWLPKQYQELIPFVKPAPID 129
++ W+P+ Y+ IPFVKPAPID
Sbjct: 454 TAIQQWMPENYRTFIPFVKPAPID 477
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 121 bits (292), Expect = 5e-28
Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 2/184 (1%)
Frame = -2
Query: 734 IXAFHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDN 555
I AF R + LPI+ LS CFR E+ + + ++RVH+F KVE FV+++P +
Sbjct: 245 IAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQS 303
Query: 554 ASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSC 375
A+ +D ++ + +ALG+ R + + S L +A++K D+EAW PG + E+ S
Sbjct: 304 AA--ELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSA 361
Query: 374 SNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTE-DGI-KVP 201
SNC ++Q+RRL ++Y K + T+Y H N T A+TR + ++LE Q + G+ ++P
Sbjct: 362 SNCTDFQSRRLGIKY---KTADGTTKYAHTCNGTALASTRALISVLETFQNDKKGLGELP 418
Query: 200 EILK 189
E L+
Sbjct: 419 EPLR 422
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 121 bits (292), Expect = 5e-28
Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 2/184 (1%)
Frame = -2
Query: 734 IXAFHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDN 555
I AF R + LPI+ LS CFR E+ + + ++RVH+F KVE FV+++P +
Sbjct: 245 IAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQS 303
Query: 554 ASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSC 375
A+ +D ++ + +ALG+ R + + S L +A++K D+EAW PG + E+ S
Sbjct: 304 AA--ELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSA 361
Query: 374 SNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTE-DGI-KVP 201
SNC ++Q+RRL ++Y K + T+Y H N T A+TR + ++LE Q + G+ ++P
Sbjct: 362 SNCTDFQSRRLGIKY---KTADGTTKYAHTCNGTALASTRALISVLETFQNDKKGLGELP 418
Query: 200 EILK 189
E L+
Sbjct: 419 EPLR 422
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 324 DEKDERGH*IRAHAERDHVRHHQGHLRHTRSTPDRGRHQGTG 199
D R H H +D RHH R+ R DR RHQ G
Sbjct: 85 DRNRHRNHDGNRHQNQDRSRHHNQD-RNRRQNHDRNRHQSQG 125
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 324 DEKDERGH*IRAHAERDHVRHHQGHLRHTRSTPDRGRHQGTG 199
D R H H +D RHH R+ R DR RHQ G
Sbjct: 929 DRNRHRNHDGNRHQNQDRSRHHNQD-RNRRQNHDRNRHQSQG 969
>AC006810-7|AAK84622.2| 333|Caenorhabditis elegans Serpentine
receptor, class t protein40 protein.
Length = 333
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 169 YCLGSQGFRISGTLMPSSVWCTSSMAQMTLVVAHMVAFSMCTYSVAAF 312
YC + ISGT++ ++WC+S M+ + LV ++ S T++ F
Sbjct: 101 YCTYPRIMYISGTIV-CALWCSSCMSALLLVANRILGMSKPTWAAMIF 147
>U51925-1|AAA97909.1| 396|Caenorhabditis elegans trehalase I
protein.
Length = 396
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 284 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 159
LNA MCA R++ ++ E+ +KV E W ++ +EL
Sbjct: 159 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 200
>AJ512337-1|CAD54510.1| 567|Caenorhabditis elegans trehalase
protein.
Length = 567
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 284 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 159
LNA MCA R++ ++ E+ +KV E W ++ +EL
Sbjct: 330 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 371
>AF039713-5|AAB96724.2| 567|Caenorhabditis elegans Trehalase
protein 1 protein.
Length = 567
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 284 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 159
LNA MCA R++ ++ E+ +KV E W ++ +EL
Sbjct: 330 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 371
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical protein
C09F9.2 protein.
Length = 1642
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 689 PIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSP 564
PIK A F + HG++ RG+ V+ FE+VE V + P
Sbjct: 1060 PIKAA--PEFFENAMKYHGKNARGVMTVNFFEEVETSVESRP 1099
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 462 WSSKPCCFQEARLGGLVPRIRCVQGTCL 379
WSS C + +G R RC QG+CL
Sbjct: 831 WSSWSSCSTKCGIGQRTRRRRCYQGSCL 858
>AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical
protein Y76A2B.2 protein.
Length = 782
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 501 FAELFSIVYHFVHHLPRCVIMRRC*NKLFHLFKLMYSKDTTRVTSMRSNLLSEACGESRI 680
F L +I Y + H I R+ +K++ + L Y KD+ + ++ S S + + I
Sbjct: 150 FHYLTNIDYIYFHKTKIGRIERKAFSKMYQIDHL-YFKDSIEIATIESEAFSGSQVDEMI 208
Query: 681 FDG 689
FDG
Sbjct: 209 FDG 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,184,965
Number of Sequences: 27780
Number of extensions: 369819
Number of successful extensions: 1026
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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