Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_H05
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family pr...    94   8e-20
Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF125971-1|AAD14769.2|  469|Caenorhabditis elegans Hypothetical ...    28   5.6  
AF022975-9|AAB70669.1|  344|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z82267-2|CAB05190.1|  410|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>U23484-4|AAC46768.2|  260|Caenorhabditis elegans Nudix family
           protein 6 protein.
          Length = 260

 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 44/103 (42%), Positives = 67/103 (65%)
 Frame = -2

Query: 697 SETAIRXFKEEALNSLSLADKIQWEKEIDEFFSEGEVIYQGYVDDCRNTDNSWIETIAYN 518
           S+T  R F EEA++ +   D     + +DE ++ G+ +Y+GYVDD RNTDN+W+ET+ +N
Sbjct: 157 SQTLRREFAEEAMHGI--VDS----ENLDELWNNGKELYRGYVDDPRNTDNAWMETVVFN 210

Query: 517 FHDESGLTVGLLKLHAGDDAVGVRWVDITPDLKLYASHTEIVN 389
           FHD  GL    + L AGDDA  +RW+ +  +  LYASH+  ++
Sbjct: 211 FHDSKGLLKN-VALQAGDDAKALRWIAVNSNEPLYASHSHFID 252


>Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical
           protein B0240.2 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 551 SIPTVIHITLIYYFTFTKEFIYFFLPLYLI 640
           SI T+IH+ LI+   F K   YF + ++++
Sbjct: 112 SISTIIHVFLIFTLIFPKMMTYFMISIHVM 141


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 87  RFLHIDGTCLDLLTMYHIF 31
           RF HIDG  L LL +YH F
Sbjct: 560 RFAHIDGDHLTLLNVYHSF 578


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 87  RFLHIDGTCLDLLTMYHIF 31
           RF HIDG  L LL +YH F
Sbjct: 560 RFAHIDGDHLTLLNVYHSF 578


>AF125971-1|AAD14769.2|  469|Caenorhabditis elegans Hypothetical
           protein Y4C6B.5 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 265 INYVVIYTICINASKCFSDKDIDLHEVYSSFINPSAPIVCSRRHSRATAGSSTPRYSYL* 86
           I Y    T C N S  + DKDI     +  FI+ S  ++C    +    G++T  +S + 
Sbjct: 39  IKYQQNETFCRNVSAYYDDKDIQAAANHFYFIS-SLTLLCPSLVTTLLLGAATDYWS-IK 96

Query: 85  IPAHRWHLSRSLNYVSYIY 29
           IP    ++   L  ++Y++
Sbjct: 97  IPLIIPYIGCILGTINYVF 115


>AF022975-9|AAB70669.1|  344|Caenorhabditis elegans Hypothetical
           protein K09C6.2 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 259 YVVIYTICINASKCFSDKDIDLHEVYSS 176
           + ++   C + S CFSDKD+D     SS
Sbjct: 128 FKIMRQCCCSGSDCFSDKDLDAVSASSS 155


>Z82267-2|CAB05190.1|  410|Caenorhabditis elegans Hypothetical
           protein F38C2.4 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +2

Query: 548 VSIPTVIHITLIYYFTFT-KEF 610
           V + T+I  TL+YYFTFT KE+
Sbjct: 118 VLLVTLICFTLLYYFTFTGKEY 139


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 238 CINASKCFSDKDIDLHEVYSS 176
           C + S CFSDKD+D     SS
Sbjct: 135 CCSGSDCFSDKDLDAVSASSS 155


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 238 CINASKCFSDKDIDLHEVYSS 176
           C + S CFSDKD+D     SS
Sbjct: 135 CCSGSDCFSDKDLDAVSASSS 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,295,694
Number of Sequences: 27780
Number of extensions: 303943
Number of successful extensions: 939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)