Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_H03
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 40 0.002
01_05_0484 - 22621614-22621676,22621798-22621911,22622006-226224... 40 0.003
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 36 0.028
08_01_1026 - 10366534-10368021,10368505-10368525 33 0.34
09_06_0031 - 20344594-20344611,20345578-20345813,20345899-203460... 32 0.59
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 32 0.59
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 31 0.79
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 30 2.4
03_06_0561 + 34728428-34728439,34728529-34728615,34728729-347287... 30 2.4
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 29 3.2
04_03_1022 - 21778315-21779007 29 3.2
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 29 4.2
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 4.2
11_04_0132 - 13804018-13804114,13804196-13804274,13804709-13804880 29 5.5
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 28 7.3
09_04_0159 + 15213752-15214028,15214158-15214399 28 9.7
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 28 9.7
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 28 9.7
01_06_0282 - 28160321-28160417,28160585-28160653,28161090-281611... 28 9.7
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = -2
Query: 683 CQKSMEGRLEQLIRREKKNLKPIXXXXXXXXXXEAKPISPELY-CEICKTSMTCSEQMTM 507
CQ ++ L+ + + + NL+ ++ +S ELY C++C T +
Sbjct: 229 CQSDLQSHLK--VMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKVCSVKCTFERMLAY 286
Query: 506 HLNGKRHLTKEKQHI---LKMMKCGSE 435
HL GK+HL +E + + ++C SE
Sbjct: 287 HLTGKKHLKQENLQLSCEICKLQCNSE 313
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 563 ELYCEICKTSMTCSEQMTMHLNGKRHLTK 477
+L CEICK + ++ H GK+H K
Sbjct: 300 QLSCEICKLQCNSEKVLSDHRYGKKHQAK 328
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 578 KPISPELYCEICKTSMTCSEQMTMHLNGKRH 486
K + L C +C+ TC + HL +H
Sbjct: 212 KAAAATLICRVCQAKFTCQSDLQSHLKVMKH 242
>01_05_0484 -
22621614-22621676,22621798-22621911,22622006-22622453,
22623052-22623179,22623747-22623821,22623954-22624040
Length = 304
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 566 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEK-QHILKMMKCGSENEKKQKAPVKQEKTE 390
P +C +CKT+ T + + H +GK+H K K H + G E K+ ++
Sbjct: 92 PPWFCSLCKTTTTSKQTLLSHADGKKHRAKAKAYHASQKQANGVEQTPKETVGAPVTESA 151
Query: 389 KSNDETAAD 363
+ N+E + +
Sbjct: 152 QVNNERSTE 160
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = -2
Query: 554 CEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDE 375
C +C+ S T + HL GKRH K+ CG+ N K +EKT +D
Sbjct: 255 CALCQVSATSEGALNEHLEGKRHKA-------KLAHCGASNAIKDGKSSLKEKTANKDDA 307
Query: 374 TAAD 363
+D
Sbjct: 308 GPSD 311
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -2
Query: 560 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSN 381
L+C+ CK + M HL GK+H K + + N+KK+++ E+T N
Sbjct: 334 LWCDRCKVRCDNNVTMADHLRGKKHSGLNK--VWTSINAVRMNKKKEQSAATWEETVNEN 391
Query: 380 DET 372
+ T
Sbjct: 392 ERT 394
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 578 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 477
KP + +L C +C + T + M HLNGK H K
Sbjct: 45 KPKAADLTCAVCGITSTGEKAMQDHLNGKSHKKK 78
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 578 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 477
K I L C C T M +HL GK+H K
Sbjct: 334 KQIGEFLGCASCNVMATSESGMRLHLAGKKHRNK 367
>09_06_0031 -
20344594-20344611,20345578-20345813,20345899-20346018,
20346102-20346198,20348243-20348335
Length = 187
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 557 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKM-MKCGSENEKKQKAPVKQEKTEKSN 381
YCEI TS+ S MT+H+ GKR T + +L+ ++ G + ++Q+ E
Sbjct: 67 YCEIDGTSLCLSCDMTVHVGGKR--THGRYLLLRQRVEVGDKPGHMDDVAMQQKDPENRT 124
Query: 380 DETAA 366
D+ A
Sbjct: 125 DQKKA 129
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 31.9 bits (69), Expect = 0.59
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 557 YCEICKTSMTCSEQMTMHLNGKRH 486
YC+IC+ + + M HL GKRH
Sbjct: 383 YCDICEVRCSSEKMMASHLAGKRH 406
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 31.5 bits (68), Expect = 0.79
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 1/128 (0%)
Frame = -2
Query: 782 VHITSKSHADSHYAGRPHRAVVEGRKKPKNTILCQKSMEGRLEQLIRREKKNLKPIXXXX 603
VH + H D+H G+ H+A + + N + S + + N+
Sbjct: 168 VHCNGEWHFDTHLKGKRHQANTQALLEQSN----KNSGNSESHDGTKAQPSNVSHHAEKK 223
Query: 602 XXXXXXEAKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKK 423
E + + + C C+ TC + HL G+RH K Q + + K N K
Sbjct: 224 KRKKKKEEEEEATWI-CRACQAVCTCESDLQNHLRGRRHQLK-VQALPEAAKQEKNNPPK 281
Query: 422 -QKAPVKQ 402
K P KQ
Sbjct: 282 LAKNPNKQ 289
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 557 YCEICKTSMTCSEQMTMHLNGKRHL 483
+CE+C T + HL+GK+H+
Sbjct: 363 FCEVCSLKCTSQRMLADHLSGKKHI 387
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 419 KAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAE 246
+ PV+ +EKS+D + A+ +V K + A D + D+ + E+T K E
Sbjct: 103 EVPVENSSSEKSSDNSVAE--VVPEKDAETPAAQDTTSVVEDKSETPEMTASSEKPEE 158
>03_06_0561 +
34728428-34728439,34728529-34728615,34728729-34728750,
34728843-34728925,34729139-34729171,34729468-34729546,
34729642-34729694,34729931-34729991,34730168-34730250,
34730418-34730513
Length = 202
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -2
Query: 557 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSND 378
YC++C+ + S H+NGK+H + +++ + E +K+ +K+ K S
Sbjct: 83 YCKVCECVVKDSANYLDHINGKKH-QRALGMSMRVERASLEQVQKRFESLKKRKDPGSFS 141
Query: 377 ETAAD 363
E D
Sbjct: 142 EQDLD 146
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 482 TKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVAN-KAIDVDTAID 315
TK ++ +C + K +K + KT+++ + DC +AN K I +D D
Sbjct: 803 TKTNPSKRRVTRCFKTSNKAKKGKCSEMKTQRNKEPYTTDCEKIANDKPISLDDDFD 859
>04_03_1022 - 21778315-21779007
Length = 230
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = -2
Query: 407 KQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 264
+ + ++ +ETAA ++V + + + + +D ++V +ITDE
Sbjct: 166 RARRRREAEEETAAAAVVVDDVEVSSSHHVHAVAHVVDGQNVVDITDE 213
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 575 PISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEK 396
P P+LYC+ + C + MH +G+ K+H + + GS+NE+ KA EK
Sbjct: 215 PTFPQLYCK-GELLGGCDIVIAMHESGELK-DVFKEHNIPLQPQGSKNEEAVKAKPDTEK 272
Query: 395 T 393
+
Sbjct: 273 S 273
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 578 KPISPELYCEICKTSMTCSEQMTMHLNGKRH 486
K + P L CE+CK E + +H GK+H
Sbjct: 273 KVVQP-LTCEVCKIQCDTPEVLRIHKTGKKH 302
>11_04_0132 - 13804018-13804114,13804196-13804274,13804709-13804880
Length = 115
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -2
Query: 533 MTCSEQMTMHLNGKRHLTKEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETA 369
M S +T+ + KR TK K L + C E +AP+ E +K ND A
Sbjct: 1 MATSAPLTLKMRRKRRNTKRKD--LSIAPCMLEECSIGQAPIISEDEKKGNDNGA 53
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 500 NGKRHLTKEKQHILKM--MKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVD 327
N ++ L ++ +++++ K E + + K E+ +K N++ + A+D
Sbjct: 268 NSEKSLAEKNKNLIETERKKLTEEKSRAECLFAKLEEQKKLNEDLRVRIEVERKNAVDQK 327
Query: 326 TAIDLLTQAIDEE 288
ID L+Q ++EE
Sbjct: 328 NHIDHLSQKLEEE 340
>09_04_0159 + 15213752-15214028,15214158-15214399
Length = 172
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 507 HSHLLRASHGSLAYFTIQL 563
H HLLRA+ GSLA+ T L
Sbjct: 86 HHHLLRAASGSLAWMTAAL 104
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 347 NKAIDVDTAID-LLTQAIDEEDVAEITDEGSKTAEVSKT 234
+K ID A+D + QA+DEED+ E D+ AE+S T
Sbjct: 488 DKPIDDLPALDPTIEQALDEEDIGEDVDQA--VAEMSDT 524
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 479 KEKQHILKMMKCGSENEKKQKAPVKQEKTEKSNDETAAD 363
KEK++ E E+K+ + K+EKTE D + A+
Sbjct: 757 KEKENSENPESKEKEKERKENSENKEEKTENKQDNSKAE 795
>01_06_0282 -
28160321-28160417,28160585-28160653,28161090-28161145,
28161650-28161741,28162314-28162398,28162512-28162628,
28162766-28162798,28163109-28163199,28163908-28163967,
28164115-28164180,28165238-28165430,28165665-28165821
Length = 371
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 119 CPNRNRLRPPSVPQH 163
CP+ + RPPS+PQH
Sbjct: 32 CPSSRQQRPPSLPQH 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,757
Number of Sequences: 37544
Number of extensions: 277231
Number of successful extensions: 1044
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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