Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_G23
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   4.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   4.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 331 NYKKCDWIISYFRILL 378
           NYK C  I+S ++I +
Sbjct: 118 NYKDCSGIVSAYKIAI 133


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 305 ITIFFQFQSNLSECYESDRTYS 240
           + ++ +FQ N+  C E   +YS
Sbjct: 643 LNVYPEFQENVQLCSEISESYS 664


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 331 NYKKCDWIISYFRILL 378
           NYK C  I+S ++I +
Sbjct: 118 NYKDCSGIVSAYKIAI 133


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 197 KKKLCIFQTLYAIILSRYDHFHSTQINLIEIEK 295
           K +L    TL  +  + YDH     I   EIEK
Sbjct: 31  KYQLITSTTLNWLPRTHYDHLKEIVIGGFEIEK 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,382
Number of Sequences: 438
Number of extensions: 2574
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)