Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_G22
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 132 7e-32
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 92 9e-20
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 29 0.53
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 29 0.53
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 28 1.6
SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces p... 27 2.1
SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2 |... 27 2.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.8
SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha su... 27 3.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.8
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 3.8
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 3.8
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 26 5.0
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 26 6.6
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 26 6.6
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 26 6.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 6.6
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 6.6
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 8.7
SPAC1002.07c |ats1||N-acetyltransferase Ats1 |Schizosaccharomyce... 25 8.7
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 132 bits (318), Expect = 7e-32
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
Frame = -2
Query: 610 IVWVLGGPGSGKGTQCDKIVAKYG-FTHLSTGDLLRAEV-KSGSERAKCLTAIMERGELV 437
+++VLGGPG+GKGTQCD++ K+ F H+S GD LR E + GS+ + ++ G++V
Sbjct: 4 VIFVLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIV 63
Query: 436 PNEIVLDLLKEAILARAEES-KGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLT 260
P EI + LL+ + ++ FLIDG+PRE Q FE+++ P +YF ET+
Sbjct: 64 PMEITISLLETKMKECHDKGIDKFLIDGFPREMDQCEGFEKSVCPAKFALYFRCGQETML 123
Query: 259 QRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVL--AQYPDKLRRINAERPVDEIFAEV 86
+RL+ R +SGR+DDN E+IK R T+ + V+ + ++L I+AE+ D +F +
Sbjct: 124 KRLIHRGKTSGRSDDNIESIKKRFVTYTKASMPVVEYLKSQNRLITIDAEQDPDAVFEDT 183
Query: 85 QSILDP 68
L P
Sbjct: 184 VKALQP 189
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 91.9 bits (218), Expect = 9e-20
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Frame = -2
Query: 601 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 422
++G PG+GKGTQ I KYG HL+TGD+LR++V +E K IM++G LV ++IV
Sbjct: 8 LVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLVSDDIV 67
Query: 421 LDLLKEAILARAEESKGFLIDGYPREKSQG----IAFEENIAPVSVIIYFEASSETLTQR 254
++K+ IL E GF++DG+PR Q +E ++ ++ + E L +R
Sbjct: 68 TGMIKDEILNNPECKNGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDELLVRR 127
Query: 253 LLGRAASSG 227
+ GR G
Sbjct: 128 ITGRLVHPG 136
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 29.5 bits (63), Expect = 0.53
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 640 MAPIDTSKKPI--VWVLGGP-GSGKGTQCDKIVAKYGFTHLSTGDL 512
+ PI+ + +P V+V+ GP GSGK T + K GF ++ DL
Sbjct: 3 VTPINPTNQPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYIEGDDL 48
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 622 SKKPIVWVLGGPGSGKGTQCDKIVAKYGFT 533
SK I+ +LG GSGK TQ + +A+ G+T
Sbjct: 524 SKNQILVLLGETGSGKTTQITQYLAEEGYT 553
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 178 LDNNDLVLAQYPDKLRRINAERPVDEIFAEV 86
++NN LV+A DKL ++ ERP D I E+
Sbjct: 57 VENNILVMALTSDKLMIVDLERPEDIIDIEL 87
>SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 619 KKPIVWVLGGPGSGKGTQCDKIVAK 545
++ ++ + GGPGSGK T C I+AK
Sbjct: 28 QRVLIGLAGGPGSGKSTLC-AILAK 51
>SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 628 DTSKKPIVWVLGGPGSGKGTQCDKIVAK 545
D+ K I+ + GGP SGK C++++ +
Sbjct: 4 DSVKSAIIGIAGGPFSGKTQLCEQLLER 31
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -2
Query: 334 GIAFEENIAPVSVIIYFEASSETLTQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVL 155
GI+F+ A V+ YF+ S T T +LGR A + + D E L ++ L L
Sbjct: 2561 GISFDSTKAVAPVLTYFDFCSLT-TGNILGRIALAFTSID--ENANLESANIFEHARLAL 2617
Query: 154 AQY 146
Q+
Sbjct: 2618 LQH 2620
>SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 313 IAPVSVIIYFEASSETL----TQRLLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQY 146
+AP ++ A ++L + +G S A + T+K++ K + ++L LA
Sbjct: 224 VAPPLYVLLTNALDKSLGLKKLEEAIGAIEKSITASNGTCTVKMKPKAVSETDELELADL 283
Query: 145 PDKLRRINAERPVDE 101
K + NAE DE
Sbjct: 284 MKKFEKENAEISGDE 298
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.8
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -3
Query: 570 HNATRSSPNTGSLTSRLETCSGLKSKAARRGRNALPLLWKE--ASLSLMKSSWIC*KKRS 397
++ T +SP + SLTS T S L S + A + AS S+ SS S
Sbjct: 97 NSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTS 156
Query: 396 WPVLKNPKASSSTATLARSHRVSLLKRTS 310
+ + S+++AT S S L T+
Sbjct: 157 SSLASSSTNSTTSATPTSSATSSSLSSTA 185
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 634 PIDTSKKPIVWVLGGPGSGKGTQCDKIVAKY 542
P + IV V+G PG+GK T +V +Y
Sbjct: 68 PDEAPPPVIVAVMGPPGTGKSTLIKSLVRRY 98
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 187 KTFLDNNDLVLAQYPDKLRRINAERPVDEIFAE 89
+TF D + L + +KL+++NA+ D++ E
Sbjct: 1865 ETFTDEDGQALRSFSEKLQKLNAKNSKDDLCIE 1897
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 86 YLREDLIHR----TFRVYPPEFVRVLSQYEVVVVQE 181
+L +DL + TF +Y P+ +RVL EV ++E
Sbjct: 42 FLADDLFGKHFDETFEIYQPKKIRVLKTREVQYIEE 77
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -2
Query: 202 IKLRLKTFLDNNDLVLAQYPDKLRRINAERPVDEIFAEVQSILDPL 65
++ R++ ++++ L+ A+Y +L N D F++ + +DPL
Sbjct: 82 LEARVRQLVESSQLLEARYLQQLEFANVLTKADAFFSKSGNTVDPL 127
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 519 ETCSGLKSKAARRGRNALPLLWKEASL 439
+ CS + S R GR +P+L K SL
Sbjct: 19 DCCSAVASALLRHGRLTIPMLQKRTSL 45
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 169 NDLVLAQYPDKLRRINAERPVDEIF 95
+ +VL Q+PDKL R + VD ++
Sbjct: 196 DQMVLMQFPDKLPRFMGDADVDPVW 220
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 157 LAQYPDKLRRINAERPVDEIFAEVQSILD 71
L++ ++L N++RP +IF + Q+I++
Sbjct: 1339 LSELKERLNASNSDRPSPDIFKDTQAIMN 1367
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 55 LTRPAGPGSTVPPRRSHP 108
L+RP PG PP+R+ P
Sbjct: 492 LSRPPSPGIVTPPQRTSP 509
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 574 GTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEI--VLDLLKEA 401
G +KI++ + + S K R++C ++ GEL+PN + + D L+
Sbjct: 589 GVVLEKIISAVTYDNTSASYGFSDVQKINEMRSRCCFELVRLGELMPNPLMNIFDQLQSI 648
Query: 400 I 398
I
Sbjct: 649 I 649
>SPAC1002.07c |ats1||N-acetyltransferase Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 168
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 406 EAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 251
EA + E + GF+ + P + G+ EEN P + IYF + T T R+
Sbjct: 35 EATIPNLEVAFGFIDEVTP--VAYGVFIEENDQPAGMAIYF-LNFSTWTSRV 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,833,856
Number of Sequences: 5004
Number of extensions: 55441
Number of successful extensions: 178
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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