Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_G19
         (344 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    32   0.11 
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600...    27   3.9  
11_01_0621 - 4981070-4981136,4982906-4983825                           26   9.1  
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301...    26   9.1  
08_01_0374 + 3301301-3301521,3301723-3301852,3301895-3301903,330...    26   9.1  
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34...    26   9.1  
06_01_0882 + 6759378-6759707,6759837-6760488,6760609-6760673,676...    26   9.1  
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267           26   9.1  

>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
            22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 32.3 bits (70), Expect = 0.11
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 145  AVSIRVVVFGRINDVRAVVNRFVAVSLSVGHSQQSEDENHEEFHFYMITSYHRRK 309
            A  I  +++G ++D     ++F+ +S       QS+DEN +  H  +  +YH +K
Sbjct: 985  ACDIIRILYGEVHDHSPFDDKFLPLSFDAQIDSQSDDENDKSGHGRIKGNYHSKK 1039


>10_08_0141 +
           15159160-15159306,15159708-15159815,15159958-15160006,
           15160067-15160182,15160358-15160399,15161026-15161442,
           15162356-15162509,15162911-15162975,15163793-15163870,
           15163951-15164061,15164227-15164271,15164677-15164850,
           15165383-15166335,15166471-15166681,15167037-15167196,
           15168786-15169174
          Length = 1072

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 303 PVITRDHIKMKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 136
           PV  + +     FMI+  ++L + N    G  P+D+  Y+ + P DY      Y+P
Sbjct: 474 PVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYL-DLPVDYMDLFKLYDP 528


>11_01_0621 - 4981070-4981136,4982906-4983825
          Length = 328

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 224 KETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPLXPGARGGK*RIS*K 57
           K+  +    TAR    + +T +  M+ + +L T + I   +PL  G  GGK ++S K
Sbjct: 166 KQGKSTTAKTARKQRTIGRTRSRSMDRSVSLDTGLLIKLFLPLSVGGGGGKKKVSPK 222


>08_02_1512 +
           27627740-27629009,27629111-27629256,27629842-27630101,
           27630346-27630412,27630511-27630545,27630818-27631587,
           27631633-27631793
          Length = 902

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = -3

Query: 201 DNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDR---PPXPWCSRWEVKNILEN 55
           ++RP  VN    Y P      P   G+YY      P  P  S W+  N  E+
Sbjct: 215 EHRPQTVNATVHYYPGDGAAGPPLPGSYYGSAAPPPSPPRVSAWDFFNPFES 266


>08_01_0374 +
           3301301-3301521,3301723-3301852,3301895-3301903,
           3302349-3302486,3302616-3302948,3303280-3303463,
           3303647-3303819
          Length = 395

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 73  YFPPRAPGXRGTVHVICTVVDRFVAVSIRVVVFGRIND 186
           Y PP  P  RG   +IC VV+      + +   G   D
Sbjct: 58  YVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFD 95


>07_01_0043 +
           343777-343953,345198-346716,346831-346977,347378-347940
          Length = 801

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 7/26 (26%), Positives = 19/26 (73%)
 Frame = +1

Query: 211 VAVSLSVGHSQQSEDENHEEFHFYMI 288
           +++++++G S    D++ + FHFY++
Sbjct: 21  ISLTVAIGSSNDGLDKSIKPFHFYLV 46


>06_01_0882 +
           6759378-6759707,6759837-6760488,6760609-6760673,
           6761363-6761440,6761523-6761633,6761739-6761783,
           6762200-6762373,6762841-6763797
          Length = 803

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 303 PVITRDHIKMKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI 133
           PV  + + +    M +  ++L + N    G  P+D  PY +  P+ Y  +   Y+P+
Sbjct: 457 PVYLKAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPY-MELPEHYLDHFKLYDPV 512


>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
          Length = 769

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 198 NRPYIVNPPKDYNPNGNGYEPIDNGAYYVD 109
           N PY+ NP +D N     +EP+D+    +D
Sbjct: 385 NYPYVSNP-EDPNHEPRQHEPLDSDVQVID 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,140,016
Number of Sequences: 37544
Number of extensions: 192656
Number of successful extensions: 477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)