Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_G19
         (344 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   0.97 
CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               30   2.2  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       30   2.2  
U59347-1|AAB03433.1|  102|Homo sapiens immunoglobulin heavy chai...    29   2.9  
AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.     29   3.9  
BC017311-1|AAH17311.1|  838|Homo sapiens kinesin family member C...    28   9.0  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 218 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 102
           T    +TT RTS  +P TTT+  T    + ++  T TVP
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVP 174



 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 230 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPL 99
           T+  T T   TT  T++ +P TTT+  T T +STT  +  T  +
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVPTTTSI 191


>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 218 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 102
           T    +TT RTS  +P TTT+  T T  +TTV  T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 218 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 102
           T    +TT RTS  +P TTT+  T T  +TTV  T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173


>U59347-1|AAB03433.1|  102|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 102

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 165 YNPNGNGYEPIDNGAYYVDRPPXPWCSRW 79
           ++P  N   P D   YY  R P P+ + W
Sbjct: 61  FSPQLNSVTPEDTAVYYCARDPLPYATNW 89


>AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 236 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 102
           WPT   T ++L T   +S  +P T       TN++    +  T+P
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP 223


>BC017311-1|AAH17311.1|  838|Homo sapiens kinesin family member C2
           protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  PPRAPGXRGTVHVI 120
           PPRAPG  GT+H++
Sbjct: 613 PPRAPGTAGTLHLV 626


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,599,546
Number of Sequences: 237096
Number of extensions: 1021694
Number of successful extensions: 2150
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)